Clupea harengus (Atlantic herring): 105902865
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Entry
105902865 CDS
T09045
Symbol
notch1b
Name
(RefSeq) neurogenic locus notch homolog protein 1b
KO
K02599
Notch 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105902865 (notch1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_3
Ank_4
Ank_5
DL-JAG_EGF-like
EGF_3
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
105902865
NCBI-ProteinID:
XP_031426344
Ensembl:
ENSCHAG00000021929
UniProt:
A0A6P8FK13
LinkDB
All DBs
Position
7:10832430..10865110
Genome browser
AA seq
2492 aa
AA seq
DB search
MHRFLVKLTTLLVLVALTKGQGCTGPDSCLSGGICEPTPNGRGKCKCPEKYLGSRCQHHN
PCFYSPCENGGTCRVAARDNRFESVCDCRPGFMDKLCLTPTDNVCLTSPCRNGGTCELIN
TRDYRCRCRPGWSGKTCQQADPCASNPCANSGTCRAFESHYLCDCPPTFYGQTCKQDVNE
CTQNPTICKNGGTCVNEVGTYHCRCLLEYTGKHCEILYMPCNPSPCNNGGTCVQKGETTY
QCTCLPGFNGQNCEHNINDCPEHRCENNGVCVDGVNTYNCRCKPEWTGQFCLEDVNECDL
MPNACQNGGTCLNTMGGYHCVCVNGWSGDDCSENIDDCADAACAKGATCHDRVASFYCQC
PHGRTGLLCHLEDACISNPCQKGSNCDTNPVNGKAICTCPTGYVGPSCDQDIDECSLGAN
PCEHGGKCINTKGSFQCKCPAGYVGARCELDVNECMSNPCQNDATCLDQIGGFKCICMPG
YEGIYCQVDTNECASAPCLNNGKCIDKINSFECQCPTGFSGSQCQVDADECASTPCKNGG
KCTDGPNKYACECTEGYTGQHCELDIDECASNPCHYGTCKDGLATFSCQCKPGYTGRLCE
TNINECLSQPCQNGGTCQDSVNSYRCLCPKGTSGINCEIDVDDCKSNPCDYGTCIDKING
YECTCKPGYTGTMCNINIDECLSNPCHNGGTCVDGINRFTCQCREGFQDPTCRSQINECL
SNPCIHGHCEDQVNGYNCICDNGWSGANCDVNNNECDSNPCMNGGSCRDMTSGYYCTCRA
GFSGPNCQTNINECASNPCLNQGVCIDDVAGYKCNCLLPYTGENCETLLEPCAPKPCKNG
GECRESEDYESFSCVCPRGWQGQTCEIDINECVKSPCKNGASCQNTIGSYQCSCKPGFTG
RDCETDINDCKPNPCSNGGVCRDGVNSFVCTCEPGFRGIRCEEDINECESNPCKNGANCT
DFVDSYTCTCPPGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCLCPPGFTGSYCQHD
INECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTGTTY
SCECQSGWTGLYCDVPSVSCEVAAKQQGVEVTHLCRNSGQCLDAGNTHFCRCQAGYTGSY
CEDQVDECVPNPCQNGATCTDYLGGYSCECVPGYHGTNCSNEINECLSQPCQNGGTCIDL
INTYKCSCPRGTQGIHCEINVDDCNPSTDPLTKEPKCFNGGECVDGVGGYRCICPAGYVG
ERCEGDVNECLSNPCDPRGTHNCVQLTNNYRCECRTGYTGKRCEQVFDGCKSKPCRNGGT
CAVASNTAHGFICRCPPGFTGSTCEGDAHSCGTLHCRNGGTCIAGHKNPLCLCPAAFTGP
ECQYPADSPCQSNPCYNSGTCQYTSEAPYYHCICPPQFNGLLCHVLDHPFIGGRGYDITP
APEVEASCEIDDCDRRSADGVCDSKCNNYECGWDGGDCSLNFDEPWKNCSAALQCWRYFN
DGKCDEQCHNAGCLYDGFDCQHLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLDC
AHNMPEKLAVGRLVLVVRIHPDQLRSNHSGFLRELSRVLHTNVVFRRDAKGELMIYPYYG
NEQELKKHAVKRSVDSWSDMHANVMATLTDGMYRMVNVRQRRELDQMQIKGSVVYLEIDN
RQCYQQSTECFQSATDVAAFLGALASSGNLDMPYVIEAVASENSAPPPNELYPIYVVLAG
LIMLAFVGVGMVASRKRRRENGQLWFPEGFKTSETNKKKRREPVGEDSVGLKPLKNLSDF
SLMDDNQNEWGEEEPSEHKRFKFEEQAMLDLDDQTDHRQWTQQHLDAADLRIPSIAPTPP
QGEIENDCMDPNVRGPDGFTPLMIASCSGGGLETGNSEEEEDTSANVINDFIYQGANLHN
QTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGRTPLHAAVAADAQGVFQILIR
NRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNAVDDFGKSALHWAAAVNNMD
AAMVLLKNGANKDMQNNKEETPLFLAAREGSYETARVLLEHFANREITDHMDRLPRDIAQ
ERMHHDIVRLLDEYNLVRSPPVHSAPLANSLSPPLCSPNGYLNNMKPAVHGKKARKPGSG
SAKGVACKDGGKDMKNKKKKSQEGRGGLLDSSAVLSPVDSLESPHGYISDVSSPPLMTSP
FQHSPTSMSLGHLQAMPPDAHLANLNHLGMSNKQFEPLPPRLTHLPMASAGNGPCDWLSR
MHGGMGQQPPQSQFNSLGGNRGQGCMGHQGNGSVSHGLMHNGLASSTLSQMISFPGIPNS
HLGNQTHLMQGQPMQQMQQSLQQQLQQQQNSNPPSSVSPGFMSGDMGGPEVIHTILPQDT
QIMSAQLGPSLSSTQFLTPPSQHSYSATMEGNTPNHQLQVPDHPFLTPSPGSPDQWSSSS
PHSNMSDWSEGISSPPNSMQSQIGHIPNDHFK
NT seq
7479 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggtttcttgtgaaacttaccactctactcgtattggtagctctaacgaaaggg
caaggatgtactgggcccgactcttgcttgagtggaggcatctgcgagcccacccctaat
ggcagagggaaatgcaagtgtccggagaaatacctgggatcaagatgtcagcaccacaac
ccttgtttctacagcccctgcgaaaatggcggcacgtgccgagtggctgcccgcgacaac
cggttcgagagtgtctgcgattgccgcccaggcttcatggacaagctttgcctgacgccg
acggacaacgtgtgcttgacctctccttgccgaaatggaggcacctgtgagctcatcaac
accagagactaccgctgcagatgccgtcctggctggtcaggtaaaacatgccagcaggca
gatccctgtgcctcaaacccatgtgccaacagcggtacctgcagagcctttgagtcccat
tacctgtgcgactgtccgcctaccttctacgggcagacctgcaagcaggatgtcaacgag
tgcacccagaatcccacgatctgcaagaatggcggcacttgtgtcaacgaggtgggcacc
taccactgccgatgcctgctggagtacactggcaagcattgcgagatcctctacatgccc
tgcaatccctcgccctgcaacaacgggggcacctgcgtacagaaaggagagaccacctac
cagtgcacttgcctgccaggtttcaatggacagaactgtgaacacaacatcaatgactgc
ccagaacaccggtgtgaaaataatggtgtgtgtgtggacggagtgaacacttacaactgc
cgatgcaaacctgagtggacaggtcagttctgcctggaggacgtcaacgaatgtgacctg
atgccaaacgcctgccagaacgggggcacctgcctcaacaccatgggcggctaccactgc
gtgtgcgtgaacggctggtcgggagacgactgcagcgaaaacatcgacgactgcgcagat
gcggcctgtgccaagggtgccacctgccatgaccgtgtggcatccttctactgccagtgc
cctcatggtcgcacgggtctgctctgccatttggaggatgcctgcataagcaatccttgc
cagaaagggtccaactgtgacactaaccctgtcaatggcaaggccatctgcacatgcccc
acaggctacgttggtccatcctgtgatcaggacattgacgagtgctcgctaggtgccaac
ccttgtgagcacggagggaagtgcattaacaccaagggctcgtttcagtgcaaatgcccc
gcaggctatgtgggtgcccgctgtgaactcgatgtcaacgagtgcatgtccaacccttgc
cagaacgatgccacctgcctggaccaaattggaggcttcaaatgcatctgcatgccaggc
tatgagggaatctactgccaggtcgataccaacgagtgtgccagcgcaccctgcctgaac
aatgggaagtgcatcgacaagatcaacagctttgagtgccagtgccccacaggattcagt
gggagtcagtgccaggtggacgcagatgagtgtgccagcacaccgtgcaagaatggcggc
aagtgcaccgatgggcccaacaagtacgcatgtgaatgcactgaaggttacactggacag
cactgcgagcttgatattgacgagtgtgcatccaacccctgccactacggcacctgtaag
gacggcctggccaccttcagctgccagtgcaagccgggttacaccgggcgcctgtgtgag
accaacatcaacgaatgcctcagccagccatgccaaaacggaggcacctgtcaggacagc
gtcaattcataccgctgcctctgccccaagggcacctcaggtatcaactgtgaaatcgac
gtggacgactgcaaaagcaacccgtgtgactacgggacgtgcatcgacaagatcaacggc
tacgagtgcacgtgcaagccaggctacacaggaacaatgtgtaacatcaacattgatgag
tgtctgagcaacccgtgccataatgggggcacttgtgtggatgggatcaatcgcttcacc
tgccagtgtcgtgaaggcttccaggaccctacctgtcggtcccagatcaatgagtgccta
agcaacccttgcatccatggccactgtgaagaccaggtcaatggctacaactgcatctgt
gacaatggctggagcggcgccaactgcgacgtaaacaacaacgagtgcgactccaacccc
tgcatgaacggaggcagctgccgtgacatgaccagcggctactactgcacctgccgggct
ggcttcagcggtcctaactgccaaactaacattaacgagtgtgcctccaacccatgcctc
aaccaaggcgtctgtattgatgatgtcgctggctacaaatgcaactgcctactgccttac
actggggaaaactgtgagaccttgttggagccctgcgcgcccaaaccctgcaagaacggg
ggcgagtgccgcgagtcggaggactacgagagcttctcctgtgtctgtcccagaggctgg
caaggtcagacctgtgagattgacataaatgaatgtgtgaagagtccctgtaagaacgga
gcctcctgccaaaacaccattggcagctaccagtgcagctgcaaaccaggcttcactgga
cgcgactgtgagacggacatcaacgattgcaagcccaacccatgcagcaacggtggcgtc
tgcagagacggagtgaacagcttcgtctgcacatgcgagccgggcttccgtggcatcagg
tgcgaggaggacatcaacgagtgtgagagcaacccctgcaagaacggcgccaactgcacc
gactttgtggacagctacacgtgcacgtgcccaccgggcttcagcggaatacactgcgaa
aacaacacgcccgactgcaccgagagttcctgcttcaatggaggcacatgtgtggatgga
atcaacaccttcacctgcctgtgcccaccaggcttcactggcagctactgccagcatgac
atcaatgagtgcgactccaagccctgtctgaatgggggcacctgtcaggacagctatggc
acctacaagtgtacttgcccccaaggctacactggactgaactgccagaacctggtgcgt
tggtgcgactcctcgccatgtaagaacgggggcaagtgttggcagactggcaccacctac
agctgtgagtgtcagagcggatggacagggctctactgcgatgtgcccagcgtgtcttgt
gaagtggccgccaaacagcaaggtgtggaggtgacccacctgtgccgtaactctggtcag
tgtctcgatgctggcaacacccacttctgccgatgccaggcgggctacacgggcagctac
tgcgaggatcaggtggacgagtgcgtgcccaacccgtgccagaacggtgccacctgcacc
gactacctgggtggatactcctgcgagtgtgtgccaggctatcacgggacaaactgctcc
aatgagatcaatgagtgcctctcgcagccctgccagaacgggggcacctgcatcgacctg
atcaatacctacaaatgctcctgtccccgggggacccaaggtattcactgtgagataaat
gtggatgactgcaacccgtccactgaccccctcaccaaggagcccaagtgcttcaacggc
ggggagtgtgtggacggcgtgggtggctaccgctgcatctgccccgccggttatgtgggt
gagcgctgtgagggcgacgtcaacgagtgcctgtccaacccctgcgacccgcgcggcaca
cacaactgcgtccagctcaccaacaactaccgctgcgagtgccgcactggatacacaggc
aagcggtgtgagcaggtgtttgatggctgtaagagtaagccctgtcggaacggaggtacc
tgtgcagtggccagcaacactgcccacggattcatctgcaggtgtccaccgggattcact
ggctccacttgcgagggtgacgctcactcgtgtggcacactgcactgccgtaacggcggc
acctgcatcgccggccacaagaacccgctctgcctgtgcccggcggccttcactgggcca
gagtgccagtacccagccgacagcccgtgccagagcaacccctgctacaacagcggcacc
tgccagtacaccagcgaggcgccctactaccactgcatctgcccgcctcaattcaacggc
ctgctctgccacgtgcttgaccaccccttcattggcggccgcggctacgacatcacgccg
gcgcctgaggtggaggcaagctgcgagatcgatgactgcgacagacgctcggctgacggc
gtgtgtgacagcaagtgcaacaactacgagtgcggctgggacggcggcgactgctctctc
aacttcgacgaaccgtggaagaactgctcggcagcgctgcagtgctggcggtacttcaac
gatggcaagtgcgacgagcagtgccacaatgccggctgcctctacgacggctttgactgc
cagcacctggagggccagtgcaacccactttacgaccagtactgtaaggaccactatgcc
gacggacactgtgaccagggctgcaacaacgctgagtgtgagtgggacggcctggactgt
gcccacaacatgccggagaagctggccgtgggccgtctggtgctggtggtgcgcatccac
ccggaccagctgcgcagcaaccactccggcttcctgcgcgagctgagccgcgtgctgcac
accaatgtggtgttccgccgtgacgccaagggcgagcttatgatctacccgtactacggc
aacgagcaggagctcaagaagcacgccgtcaagcgctctgtggacagctggtccgacatg
cacgccaacgtcatggccacgctgacggatggcatgtaccgcatggtcaacgtgcggcag
cgccgcgaactagatcagatgcagattaaaggatctgtggtgtacctggagattgacaac
aggcagtgctaccagcagtccactgagtgcttccagagtgctactgatgtggcagccttc
ctgggagctctggcctccagcggcaacctggacatgccctacgtcatcgaggctgtggcc
agcgagaacagcgcgccgccgcccaacgagctgtaccccatctacgtggtgctggctggc
ctcatcatgctggccttcgtcggcgtgggcatggtggcttcgcgcaagcggcgccgtgag
aacggccagctctggttccccgagggcttcaagaccagcgaaaccaacaagaagaagcgc
cgcgagccggtgggcgaggactccgttggcctgaagccactgaagaacctatcagacttc
tccttaatggatgacaaccagaacgaatggggtgaggaggaaccatcggaacacaagcgc
tttaagtttgaggagcaggcgatgctggacctcgatgaccagacggaccaccggcagtgg
acgcaacagcacctggatgctgccgacctccgcatcccctcgattgcccccacaccccca
caaggcgagatcgagaacgactgcatggatccgaacgtccgtgggccagatggcttcact
cctctgatgatcgcgtcttgcagcggaggtggtctggaaaccggcaacagcgaagaggag
gaggacacgtcggccaacgtcatcaacgacttcatctaccagggcgccaacttgcacaac
caaacggaccgcacgggcgagacagcattgcacctcgctgcccgttatgcccgctctgac
gccgccaagcgcctcctggaggccagcgcagacgccaacatccaggacaacatgggccgc
acacccctccacgccgcagtggctgccgacgcacagggagtcttccagattttaattcgg
aatcgcgccacagacttggacgctcgcatgcatgacggcacaacccctctgatcctggct
gcccgactggcagtcgagggcatggtggaggagctgatcaactgccacgccgacgtcaat
gctgtcgatgactttggtaaatcggctctccactgggcagcagctgtgaacaacatggat
gcagccatggttctcctcaagaatggagccaacaaagacatgcagaacaataaggaggag
actcccctgttcctagcagcccgtgagggaagctacgagacagcaagggtccttctggaa
cactttgcgaaccgcgagatcaccgaccacatggaccgcttgccacgcgacatcgctcag
gagcgcatgcaccatgacattgtgcgcctgctagatgagtacaatctggtgcgcagcccg
cccgtacacagtgcccccctggccaacagtctctcccctccactctgctcccccaacggc
tacctgaacaacatgaagccggccgtccatggcaagaaagcccgcaagcccggcagcggt
tccgccaagggggtggcctgcaaggacggcggcaaggacatgaagaacaagaagaagaag
tcccaggagggccgtgggggcctgctggacagctcagccgtgctctcccccgtggactcc
ctggagtcgccccacggctacatctcggacgtgtcgtcaccaccgcttatgacctcgccc
ttccagcactcgcccacatccatgtcactgggccacctgcaggccatgccacccgacgcc
cacctggccaacctcaaccacctgggcatgtctaacaagcagttcgaaccgctgccccct
cgcctcacgcatctgcctatggcgagcgccgggaacggcccgtgcgactggctgtcacgc
atgcacggtgggatgggccagcagccgccacagagccagttcaatagcctcggcggtaac
cgtggccagggctgcatgggccaccagggcaacgggtcggtgtcgcacggcctgatgcac
aacgggctggcctcctcgaccctgtcacagatgataagcttcccgggcattcccaacagc
cacctgggcaaccagactcacctgatgcaagggcagcccatgcaacagatgcagcagagc
ttgcagcagcagctccagcagcagcagaactcaaatcctcccagcagcgtgagcccgggc
ttcatgtctggagacatgggcggccctgaggtcatccacaccatcctgccccaggatact
cagatcatgtctgcccagctggggcccagcctgtccagcacccagttcctcactccgccc
tcgcagcacagctactcggccaccatggagggcaacacgcccaaccaccagctccaggtg
cccgaccaccccttcctcaccccgtcccctggctccccagaccagtggtccagctcctcc
ccacactccaacatgtctgactggtccgagggcatctccagtccccccaatagcatgcag
tcgcagatcgggcacattccaaatgaccactttaagtaa
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integrated database retrieval system
