Clupea harengus (Atlantic herring): 105904188
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Entry
105904188 CDS
T09045
Symbol
afg1lb
Name
(RefSeq) lactation elevated protein 1 homolog B isoform X1
KO
K18798
peroxisome-assembly ATPase [EC:
3.6.4.7
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
char03029
]
105904188 (afg1lb)
Enzymes [BR:
char01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.7 peroxisome-assembly ATPase
105904188 (afg1lb)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
105904188 (afg1lb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFG1_ATPase
AAA_16
AAA_22
AAA
Bac_DnaA
AAA_14
AAA_19
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
105904188
NCBI-ProteinID:
XP_031436974
Ensembl:
ENSCHAG00000025071
UniProt:
A0A6P8GCE2
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Position
15:complement(19998172..20038596)
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AA seq
497 aa
AA seq
DB search
MAAYASPLTTKCLSQYLLKGSSLMKNRSWCCKVIVVRGCTTRRGSEFTANANHAAQKSSV
LLDYYESMVRSGSLREDIHQRSVLLQLEQLQGVIRAYDNTPRFKVSDRDIKVNRQRHVED
SKASDAKHKTQVTEAEQLPPKPKPPKGFYIHGNVGTGKTMLMDMFFSHVENSRKKRVHFN
AFMLDIHKRIHRLKQSLPKRSLGKMTVYDPIAPVALEISQENCLLCFDEFQVTDIADAMI
LKQLFGTLFRSGVVVVATSNRPPDELYKNGLQRATFVPFIHVLKEHCHTVCLDSGVDYRK
RDMPAAGILYYLTSEPGAERAVNDLFHELAQRQNDFTRPRVLTVLGRKLHLSRTCGSIAD
CTFQELCDRPVGASDYLEISRVFDTVFIRNIPRLSLRIKDQARRLTTLIDNFYDQKVRVV
VLADAPLESLFDQGPMVGDEERDRMLLDDLGLTQDAGEHLSLFTGEEEIFAFQRTISRLT
EMQTEQYWLQGDRSSTT
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctacgcgtcgcctctgacaacaaagtgtttgtcacagtatctattgaaaggg
tcaagtttaatgaaaaatagaagttggtgttgtaaggtcattgttgttagaggttgcaca
acaaggagagggtctgagtttactgcaaacgccaaccatgctgcacagaagtccagtgtc
cttctggactactacgaaagtatggttaggtccggttcactccgagaggacatacaccag
agatccgtccttcttcagttagagcagttgcagggagttataagggcatacgacaatact
ccacgatttaaggtgagcgacagggacattaaggtaaatcgacaacggcatgttgaagat
tcgaaagcaagtgacgcaaagcacaaaactcaagtgaccgaagccgaacagctgcccccg
aagcctaaaccacccaagggcttttacatccatggcaatgtaggcactgggaaaaccatg
ctgatggatatgttcttctctcacgttgagaacagtcgcaaaaagagggtccacttcaac
gccttcatgctggacatacacaaacggatccatcgcctgaagcaatccctgccaaaacgg
agcctcggcaaaatgacagtctacgaccccattgcgccggttgccttggagatcagtcag
gagaactgcctcttgtgcttcgatgaatttcaggtgacagacattgcagatgccatgatc
ctgaagcagctgtttgggactctcttccggtctggtgttgtggtggtggccacctccaac
cgcccacctgatgagctctacaaaaatggtcttcagagggctacctttgtgcctttcatc
cacgttctcaaggagcactgccatacagtctgcttagactctggagtggactacaggaag
agagacatgcctgcagcaggaatactgtactacctcacaagtgaacctggagcggagagg
gctgtgaatgatctgttccatgaactcgcccagagacaaaatgactttacgcggccccgg
gtcctgaccgttctgggcaggaagcttcacctgagcaggacgtgtggctctatcgccgac
tgtacttttcaggagctgtgcgacaggcctgtaggtgccagcgactacctggagatttct
cgagtgtttgacactgtctttatccggaacattccaagactctctctgaggataaaggat
caagcacgtcggctcacgacactcatagacaacttctatgaccagaaggtgagggtggtt
gtccttgccgatgctcctctggagtctctctttgaccagggccctatggtcggtgatgag
gagagagaccgcatgttgctggatgatctaggcctaacacaggatgccggtgaacatctc
tctttgttcacgggagaagaggagatctttgcatttcagaggaccatctcaagactgaca
gaaatgcagacggaacagtactggcttcaaggagatcgcagcagcacaacatga
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