Clupea harengus (Atlantic herring): 105904988
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Entry
105904988 CDS
T09045
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00310
Lysine degradation
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
105904988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105904988
03036 Chromosome and associated proteins [BR:
char03036
]
105904988
Enzymes [BR:
char01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
105904988
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
105904988
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
105904988
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
105904988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2HE
Zn-ribbon_8
zf-C2H2_11
zf-C2H2_6
BDHCT_assoc
C1_4
zf_PR_Knuckle
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
105904988
NCBI-ProteinID:
XP_031430670
UniProt:
A0A6P8G5R8
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All DBs
Position
10:1290128..1292748
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AA seq
474 aa
AA seq
DB search
VCVSGVSKREWLKQQKDQLNSYKRGGSLRSRPRVSYTEEEVPKDEDYLYCEDCEYFYIDE
CGVHGPPNFIPDTPAPVGVPDRARLTLPPGLVVRKSNIPNAGLGVFNQGQTVPRGAHFGP
YEGEVMDRDEAIESGYSWVTYKSRHTDEYIDAKRETHSNWMRYVNCARDGDEQNLVAFQY
RGGIVYRCCKPIAPGEELLVWYGEDYARDLGITFDYLWDIKSSAKGTSQSSQVFSCSLCP
FSYTAQIYLHKHIRRSHTDEYVRLLRSGEIRPETLAPSRSSNQQTQKPLTVPSRSTSSKR
THTGERPYHCTQCGKSFTREEHLKAHQRTHTGERPYHCTQCGKSFTQEGNLKDHQRIHTG
ERPYHCTQCGKSFTVGGDLKLHQRIHTGERPYHCTQCGKSFTLEHHLKAHQRTHTGERPY
HCTQCGKSFTEGGHLKLHQRTHTGERPYHCTQCGKSFTSTSQLKTHRCTHTKEP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtgtgtcaggggtgtcaaagagagagtggttgaaacagcagaaagaccagttgaac
agctacaagcgtggaggcagcctgcgcagcagacccagagtgagctacacagaggaagaa
gtgcccaaggatgaagattacctctactgtgaggactgtgagtatttctacattgatgag
tgtggggtccatggtccccctaacttcatccccgacaccccagctcctgttggggtccca
gaccgagccagactcaccctgccacctggactggtggtcagaaagtccaacatcccaaac
gcaggtctgggggtgttcaaccagggccagacggtgccaagaggggcgcactttggcccc
tatgagggagaggtgatggacagggatgaggccatagagagcggatactcctgggtgaca
tacaagagccgacatacagatgagtacatagacgcaaagagagaaactcactccaactgg
atgaggtatgtgaactgcgctcgtgacggtgacgagcagaacctggtggcgtttcagtac
agaggggggattgtgtatcgctgctgtaagcctatcgcccctggagaggaactgctcgtc
tggtatggagaggactacgccagagacctgggcatcaccttcgactacctgtgggacatc
aagagtagcgccaaaggtacatcacaatcgtctcaggtgttctcgtgctccctgtgtccg
ttttcctacacggctcaaatctacctccacaagcacatcaggaggagccacacggacgag
tatgtgcgactgctgaggtctggagagatcagaccagagactttggcaccttccagaagc
agcaaccaacaaacacaaaaacctctaactgtgccgtccaggtcaacatccagtaaacgc
actcacacaggagagaggccgtaccactgcactcagtgtggcaagagctttactcgagag
gaacatctcaaagcacaccagcgcactcacacaggagagaggccgtaccactgcactcag
tgtggcaagagctttactcaagagggaaatctcaaagaccaccagcgcattcacacagga
gagaggccttaccactgcactcagtgtggcaagagctttactgttgggggagatctcaaa
ctacaccagcgcattcacacaggagagaggccgtaccactgcactcagtgtggcaagagc
ttcactctagagcatcatctcaaagcacaccagcgcactcacacaggagagaggccgtac
cactgcactcagtgtggcaagagctttactgaggggggacatctcaaactacaccagcgc
actcatacaggagagaggccgtaccactgtactcagtgtggcaagagtttcacttctacg
tctcaattaaagacacaccggtgcactcacacaaaagaaccctaa
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