Clupea harengus (Atlantic herring): 105905856
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Entry
105905856 CDS
T09045
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic-like isoform X2
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105905856
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
char01007
]
105905856
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105905856
Enzymes [BR:
char01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
105905856
Amino acid related enzymes [BR:
char01007
]
Aminoacyl-tRNA synthetase
Class II (A)
105905856
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
105905856
Prokaryotic type
105905856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
AsnRS_N
tRNA_anti-codon
TraV
Motif
Other DBs
NCBI-GeneID:
105905856
NCBI-ProteinID:
XP_031413721
Ensembl:
ENSCHAG00000018266
UniProt:
A0A6P8EN12
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All DBs
Position
20:complement(21357627..21369753)
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AA seq
471 aa
AA seq
DB search
MADELTKNSDKLSVGELYVSAKQGSDEAGDGTEQKPFKTPLRALLFAGKEPFPSIYVDSQ
KEGERWEEISKSQMKTLKKLWQKEQMKRDTKDKKEAEDAERREKNLEEAKKVIIENDPSL
PEPKTAKIRLLTPLRGQRVKVFGWVHRLRRQGNNLLFIVVRDGTGFLQCVLTDQLCQCYN
GLVLATESSVALYGTLQCVPEGKQAPGGHELHCDFWELVGLAPAGGADNLLNEESDVDVQ
LNNRHMMIRGESVSKILRVRSTVTQCFRDHFFNRGYCEITPPTLVQTQVEGGSTLFSLNY
FGEEAFLTQTSQLYLETCIPALGDTFCISQSYRAEQSRTRRHLAEYTHVEAECPFITFED
RLNSLEDLVCDVVDRVLKSEAAPLLYEINPDIPEAPERLMTDTINETILLCRFPAEIKSF
YMQRCPEDRRLTESVDVLMPNVGEIVGGSMRIWDTEELLEGYKREGMDPTP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgagcttacgaaaaacagcgacaaactctctgtaggggagctctacgtgtct
gctaagcagggtagtgatgaggccggggatggaacagagcagaagccattcaaaacacca
ctgagggctttattatttgctgggaaggagccattcccatccatctatgtggattcacaa
aaggagggagagagatgggaagagatttccaaatcccaaatgaagaccttgaaaaagctg
tggcagaaggagcagatgaagagggacaccaaagataagaaagaggcagaagatgccgag
agacgagagaagaatcttgaagaagcaaagaaggtgatcattgagaatgacccaagtttg
ccggagcctaaaacggctaaaatccgccttctgacacctctcagagggcagcgggtgaag
gtgtttggctgggtgcaccgactgcgtaggcaaggaaataatttgctgttcattgttgta
agagatggaacaggcttcctgcagtgtgtgctcacagaccaactgtgtcaatgttacaac
ggcctggtcttagccaccgagagctcggttgccctgtatggtactctgcagtgtgttcct
gaggggaagcaggctcctggaggccatgagctccactgtgacttctgggagctggtaggt
ctagccccagcagggggcgctgataacctgctgaacgaggagtctgacgtggacgtgcag
ctcaacaaccggcacatgatgatccgtggtgagagcgtgtccaagatcctgcgggttcgc
tccactgtcacacagtgcttccgggaccacttcttcaaccgtggatactgtgagatcact
ccccctactctggtgcagacccaagtagagggcggctccacactcttcagcctgaactac
tttggggaggaagcgttcctgacccagacctctcagctctatctggagacctgcatccct
gccctaggggacaccttctgtatttcccagtcctaccgcgccgagcagtcacgcacacgc
cgacacctggctgagtatacccacgttgaggccgagtgtcccttcataacctttgaagac
cggctgaacagcctggaggacctagtgtgtgatgtggtggaccgtgtgctcaagtctgaa
gctgctccgctgctctacgagatcaacccagacatccctgaagctccagagaggctgatg
actgacaccatcaacgagactattctgctgtgccgctttcctgcagagatcaagtctttc
tacatgcagcgatgcccagaggaccgccgcctcactgagtcggttgatgttctgatgcct
aatgttggggagattgttggagggtcgatgcgtatctgggacactgaggagctgcttgaa
ggctacaagagagagggcatggaccccactccctaa
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