Clupea harengus (Atlantic herring): 105907851
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Entry
105907851 CDS
T09045
Name
(RefSeq) sialidase-3 isoform X1
KO
K12357
sialidase-2/3/4 [EC:
3.2.1.18
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00511
Other glycan degradation
char00600
Sphingolipid metabolism
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
105907851
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
105907851
Enzymes [BR:
char01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
105907851
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Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
BNR
Motif
Other DBs
NCBI-GeneID:
105907851
NCBI-ProteinID:
XP_031434955
Ensembl:
ENSCHAG00000011227
UniProt:
A0A6P8GJ86
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All DBs
Position
13:21242265..21245919
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AA seq
440 aa
AA seq
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MKDRFTSSGPQLPLVDRQCQPQTIHDRALFEDLKGEYDFRIPALIYVKEGKTFLAFAEKR
TVKNGKSNDENAKNLVMRKGTRQADGSLQWSDCKDLMEATKHGYRTMSPCPVYERNTNTL
FLFFICIEGEIKEADLTPGQTRLCYVITRDRGETWSLLTDLTDKVNGINLLDYKTFAVGP
GHGIAVERGKNGMRLLIPAYVKSTSTKVQPDHALVLYSDDEGQTWQAGKTLFEECGECQV
AEVRVTEGTEGTKLYCSARTWGKGMEEVPRLEALSEVTSVDFTKLKSLTLKETPHGCQGS
VLGFPASELHPGDKGTMLLFSHPTKGPEEGENGWTRRDLGVRLRESLQGAWGEPYIIHQG
KGGYSDLCEDGAHFACLMECGEFPRQRIIFQEFPLSDIPKPAQLDRHDPVPNPSDPVPNP
SDPAPNPSDPAGRCPYCLLI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaggttcacttcctctggacctcagcttcctctagtggacagacagtgccaa
cctcagactatacatgacagagctttgtttgaagatttgaagggagaatatgacttcaga
attccagctctcatctacgttaaagaagggaaaactttcctggcgtttgcagagaagcgc
actgtaaagaatggcaaatctaatgatgagaatgcaaagaatctggtgatgaggaaaggc
acacggcaggctgacggatcactgcagtggtctgactgtaaggacttgatggaggcgacc
aaacatggctaccgcaccatgagcccttgtccagtctatgagaggaacacaaatacactg
tttctgttcttcatctgcatcgagggcgaaattaaagaagcagaccttacacctggccaa
acccgcttgtgttacgtcatcaccagggaccgtggtgagacctggagtcttttaacagat
ttgactgacaaagtcaatggtataaaccttttagattacaagacctttgcagttggacca
ggacatggcattgcagtagagaggggtaagaatggcatgaggcttctgattccagcctat
gttaaaagtacaagtacaaaagtacagccggaccatgctttggttttgtacagtgatgat
gagggacagacgtggcaagcaggaaagacactgtttgaggagtgtggtgagtgtcaggtg
gctgaggttcgagtcacagagggcacagagggcacaaagctctactgcagcgcccgcacc
tggggcaaaggaatggaggaggtgccacgtttggaggcactgagtgaggtcacatcggta
gattttaccaaattaaagagtctgactttgaaggagacgccccatggatgccagggcagt
gtgttaggcttccctgcctcagagcttcaccctggagataagggcaccatgctgctcttc
agccaccccaccaaggggccggaggaaggggagaacgggtggacgaggagggatctgggc
gtccgcctgagagagtctcttcagggagcgtggggtgagccctacatcattcaccagggg
aagggcggctactcagacctgtgtgaggatggggctcactttgcctgtctgatggagtgt
ggagagtttccccgccaacggatcatctttcaggagtttcctctcagtgatattccaaaa
ccagctcaattagacaggcatgatcctgtcccgaacccctctgatcctgtcccgaacccc
tctgatcctgccccgaacccctctgaccctgccgggcgctgcccttactgccttcttatc
tga
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