Clupea harengus (Atlantic herring): 105908396
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Entry
105908396 CDS
T09045
Symbol
grin3ba
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04020
Calcium signaling pathway
char04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
105908396 (grin3ba)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105908396 (grin3ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105908396 (grin3ba)
Ion channels [BR:
char04040
]
Ligand-gated channels
Glutamate (ionotropic)
105908396 (grin3ba)
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
105908396
NCBI-ProteinID:
XP_042559031
UniProt:
A0A8M1K5B8
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Position
22:8558158..8590811
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AA seq
1104 aa
AA seq
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MNLVFSRFLAYLHIGFQVVLHTFIYPSHLHPQPCHILARIGHTVRLGALLPTRQPSRIQS
ALNRALVHLRQTGNNFLPYNLSLENRFHLQMLLRMPPSGLAELLVSMLQQGGWQGGTAVL
CDGWEASGVLQTLEQAERLGTGTGRGRRRVHWHLWEPLDLTGSPEGMGEEEMLELLSQHL
SQAPSPRATAVLLFGSDPQCVSAVLTAAHRLSLAQPLLATAAHWIVGYPLTLDALQSIGS
PQGLLAYGEVNRKPLSFYIRDALQLIGQAVTAATLVRPDLALIQNMVNCYDKPNKHELPS
SGQYLARFLSNTSFSGATGPVQVQRALSQVLPSQRFHVWSLQRDAVGQPSWVTVAHWQDG
QLQVDEQGLWPGGGRKPQEASPSVRARGRWRAGLPVAGSRVRVVTLVEHPFVFTREVDDE
GQCAAGQLCLDPHTNSSDLLNLMFRELAQTNSSGGGGGGTGGVGGSASGPSLTADYRKCC
YGYCIDLLEKLAEDMNFEFDLYIVGDGKYGAWKGGRWTGLVGDLLNGVADMAVTSFSINS
ARSRVVEFTSPFFSTSLGILVRSKDTAAPIGAFMWPLHWSMWVGIFVALHITALFLTLYE
WNSPFGMTPHGRNRRRVFSYSSALNLCYAILFGRVVASKTPKCWTGRFLMNLWAIFCLLV
LSSYTANLAAVMVGEKTFEELSGIHDAKLHHPSLGFRFGTVRESSAEDYMKKSFPEMHEY
MRRFNMPTTPDGVATLKTDPPQLDAFIMDKALLDYEVSIDTDCKMLTVGKPFAIEGYGIG
LPQNSPLTRNVSEYVSRYKSDGYMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFV
LLCAGVAGALLTLAGEHAFYRLVLPRLRQQQRFKYWLHTSQKIHRALNMTCEDEGKHQTT
PDRSPTLCLSDSCNIHRLQPPPPSPQPSSTTTSNSTATMAWNNQSTRGSREPGKDNKRVH
FNLETLNTYRLQAPPSGPERGLRRGLVGSPPTQLCENGGPASGLSLVLSPPACSSASSIS
ASSQWEGELQELQGRIEEFRGQLRVALARRAELQSSLEREKTCRVRAVVESAAADGPLLA
AAATTISTANSTGPFKDKDTNLRR
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagtgttctcacgattcttggcataccttcacatcgggttccaagtcgttctc
catacgttcatctaccccagtcatctccacccgcaaccctgccacatcctggcacgcatc
ggacacaccgtgcgtttgggcgcgcttttgcccactcgtcagccgtccaggatacagtct
gccctgaaccgcgccctcgtccatctccggcaaactgggaacaactttttaccctataac
ctgagcttggagaaccggttccacctgcagatgctgctgcggatgcctccctcaggcctg
gccgagctgctggtgagcatgctgcagcaggggggctggcaggggggcacggccgtgctg
tgtgacggctgggaggccagcggcgtgctgcagaccctggagcaggctgagcgcctgggc
acgggcacgggccgagggaggcggcgggtgcactggcacctctgggagcccctggacctg
acgggctccccggagggaatgggtgaggaggagatgctggagctgctgtcgcagcacttg
agccaggcgccctcgccgcgggcgaccgccgtgcttctcttcggctctgacccgcagtgc
gtttccgctgtgctgaccgccgcacacaggctgagcctcgcccagccccttctcgccact
gccgcccactggattgtaggataccctttgaccctggatgcgctgcagtccatcggctct
cctcagggcctcctggcgtacggcgaggtcaaccgcaagcccctcagcttctacatccgc
gacgcgctgcagctgatcggccaggctgtgacggctgccaccctggtgcgccccgacctg
gcgctcatccagaacatggtcaactgctacgacaagcccaacaagcacgagctgccctcg
tcaggccagtaccttgccaggttcctgtccaacacgtcgttcagcggcgccacaggcccc
gtgcaggtgcagcgggccctctcccaggtgctcccctcccaacgcttccacgtgtggagc
ctacagcgggacgccgtgggccagccctcctgggtgacggtggcccactggcaggacggg
cagctgcaggtggacgagcagggcctgtggccgggcggcgggaggaagccgcaggaggcc
tcgccgagcgtccgggcccgggggaggtggagggcggggctgcccgtggccggtagccgt
gtgcgggtggtgacgctggtggagcacccgtttgtgttcacgcgggaggtggacgacgag
ggccagtgcgccgccggccagctgtgcctggacccccacaccaacagctcggacctgctc
aacctcatgttccgcgagctggcacaaaccaatagcagcggcggcggtggtggtggtact
ggaggtgttggtggcagtgccagcggcccctccctgaccgcggattaccgcaagtgctgc
tacggctactgcatcgacctgctggagaagctggccgaggacatgaactttgagttcgac
ctgtacatcgtgggcgatggcaagtacggcgcttggaagggcggccgctggacgggtctg
gtgggggacctgcttaacggcgtggccgacatggctgtcacctccttcagcatcaactcg
gcgcgcagccgcgtcgtggagttcaccagccccttcttctccaccagcctgggcatcctg
gtgcgcagcaaggacacagcggcgcccatcggtgccttcatgtggccgctgcactggtcc
atgtgggtgggcatcttcgtggcgctgcacatcaccgcgctcttcctcacgctctacgag
tggaacagccccttcggcatgaccccccacggcaggaaccgcaggagggtgttctcctac
tcgtccgccctcaacctgtgctacgccatcctgttcggacgcgttgtggccagcaagacg
cctaagtgctggacggggcgcttcctcatgaacctctgggctatcttctgcctgctggtg
ttgtccagctacacggcgaacctggccgcggtcatggtgggggagaagacctttgaggaa
ctgtcagggatccatgacgctaagctccaccatccgtccctggggttccgctttgggacg
gtgcgggaaagcagcgcagaggactacatgaagaagagcttccccgagatgcacgagtac
atgcggcgcttcaacatgcccaccacgcccgacggagtggctacactcaagacagatccc
cctcagctggatgccttcatcatggacaaagccctgctggactacgaggtgtccatagac
accgactgcaagatgctcaccgtgggcaagccgttcgcgattgaaggctatgggatcggg
ctgccccagaactcccctctgacccgcaacgtctcagagtatgtcagccgctacaagtct
gacggctacatggacatgctgcacgacaagtggtacaaagtggtcccgtgtgggaagagg
gtcttcgcggtgacagagacgctgcagatgggtatccagcacttctcgggcctgttcgtg
ctgctgtgtgcgggcgtggcgggggctctgctcacgctggccggagaacacgccttctac
cgcctggtcctgcctcgcctccgccagcagcagcgcttcaagtactggctgcacaccagt
cagaagatccaccgtgctttgaacatgacctgtgaggatgaagggaaacaccagacaacc
ccagacagaagcccgaccctctgcctgtcagatagctgcaacatccaccggctgcagccg
cctcctccctcccctcagccctcctccaccacgacctccaactccaccgccaccatggcc
tggaacaaccagagcacccgggggtcccgcgagccaggcaaagacaacaagcgcgtccac
tttaaccttgagaccctcaacacgtaccggctccaggcgcccccctcggggcccgagcgg
gggctcaggcgggggctggtgggcagcccccccacgcagctgtgtgagaatggtggcccc
gcatccgggctcagcctggtgctgtcgccgccggcctgctcctcagcctcctccatctct
gcatcctcccagtgggagggtgagctccaggagctccagggccgcatcgaggagttccgg
ggccagctgagggtggccctggccaggcgggctgagctccagagcagcctggagcgggag
aagacatgcagggtgcgagccgtcgtggaatctgccgccgccgatgggcctctccttgca
gccgccgccaccactatctccacagccaactccactggcccttttaaagacaaagacacc
aacctgaggaggtga
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