Clupea harengus (Atlantic herring): 105909076
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Entry
105909076 CDS
T09045
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00310
Lysine degradation
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
105909076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105909076
03036 Chromosome and associated proteins [BR:
char03036
]
105909076
Enzymes [BR:
char01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
105909076
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
105909076
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
105909076
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
105909076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_6
SET
zf-Di19
zf-H2C2_5
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
105909076
NCBI-ProteinID:
XP_031423728
Ensembl:
ENSCHAG00000010975
UniProt:
A0A6P8F5A8
LinkDB
All DBs
Position
1:12703195..12709623
Genome browser
AA seq
911 aa
AA seq
DB search
MATSSGETSVEIQEGILAAVAEEESPEEEETYDNDDYYCDKCKSSFKTQCEVHGPPVFAL
DSSTPMGTLQRALLTLPAGLVVGRSRVKEGSLGIFNQGQVVPVGIHFGPYDGEVTSEEEA
LKSGYSWVICKGRNRYEFIDATRDTHSNWMRFVMCSRSNREQNLVAFQQGGRLLFRCCSP
IRLGQELLVWYSEEYARHLGLTWDQLWDNKLSSSGSNTDIGSPQLLACPYCRFSFPAKPY
LHSHVRRSHPEQHHHFLETPSSESESEALDPPVVLDTFLLGSDGPPSAQMEPVTDTGKQG
SESHQSNGMRCSTCRNGISDTDWPKDTSSSVSPTNEKGHICALCGRTFARAYHLKRHEEA
VHSPDKLYLCRPSHKPQKNLRKNLRKPSNPRRHRPSPQTEVEEEEEEEEAETARGAPLEV
YPCPQCSTAFVTEQSLQEHVELNHPQGERSDAFSTIVELSELDFCDPSDPPYEPPARKHN
LRKASLMVPSQRRGRGRPRTRIALLTRPKRKRTPKAQREGVDPQSQAQTHICCQWRETLA
DGATATSHSCCAQNGTQLTCAECQRVFADRAALRSHECVLQEGEGLYSCPQCSLPFSQPS
NLRRHQRTVHALVKPYCCGQCGKFYTQASGLKRHQEGRQHKRRRLASASVVVATATTAAA
TPIYSCAYCQFSFTAQRYLHKHVKRHHPTKFIQALDGEPQREEEQDEEEEEGGGGAREGL
ARVATQARVPQSCPQCEKTFISIKGFKSHRCFRRGEKTYPCLVCDKGFTSFYSLRQHQRI
HTGEKPHVCPHCSKSFAVVGQLNVHLRTHTGERPYLCSQCGEGFRQSGDLKRHEQKHLGV
RPHPCPQCPKSFSRPQSLRAHLQIHSGERLYRCAQCNKSFTRGYHLTRHHHKMHSLQEQQ
DGSKKKSGHEP
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaagttcaggtgagacctcggttgagattcaggagggtattttagcagcagta
gcagaagaggagtcgccagaggaggaagaaacctatgataatgacgactactactgtgat
aaatgtaagtcctccttcaagactcagtgtgaagtccatgggcccccggtgtttgccctg
gactctagcactcctatggggacccttcaaagagctctcctcacgttacctgctggcctg
gtcgttgggaggtcccgggtcaaggagggcagtctggggattttcaaccagggacaggtg
gtgccagttggaatacattttggaccgtacgatggtgaagtgacgtcagaggaagaggcg
ttgaaaagcggctactcttgggtgatctgcaaggggagaaaccggtatgagttcatagat
gcaacaagagacactcactcaaactggatgaggtttgtgatgtgttcccgtagcaaccgc
gagcagaacctggttgcgttccagcagggcgggcggctgctgttccgttgctgttctcct
atccggctggggcaggagctgctcgtgtggtactcggaggagtacgccagacacctgggc
ctgacctgggaccagctgtgggacaacaaactctcctccagtggttcaaacacagatatt
ggttcacctcagctgctggcgtgcccctactgtcggttctccttccctgccaaaccctac
ctgcacagtcacgtcaggcgctcgcatccagaacagcaccatcactttctggagacccct
tcctccgagtccgagtccgaggcgctggacccacccgtggtcctggacacctttctactc
ggctcagatggaccgccttcggcccagatggagccagtcacagacaccggcaaacaggga
agtgaatcccaccaatcaaacggcatgaggtgctccacgtgcaggaacgggatcagcgac
actgattggccaaaagacacatcatcatcggtgtcacccaccaatgaaaaaggccacatt
tgtgctctctgcgggagaacctttgcgcgggcgtaccacctgaagcgccacgaggaggct
gtccactctccagacaaactctacctgtgcagaccgagccacaagccacagaagaacctg
agaaagaacctgaggaagccctcgaacccgcggaggcacaggccgagcccgcagacggag
gtggaggaggaagaggaggaggaggaggcggagacagcaaggggggctcctctggaggtc
tacccctgcccacaatgctctactgcctttgtgactgagcagagtctgcaggaacacgtc
gagctgaatcacccacagggtgaaaggtcagatgcgttttcaaccattgtagaactctct
gagttggacttctgcgacccatcagacccgccatacgaacctcccgctcggaagcacaac
ctcaggaaggcgagcctcatggtcccgtcccagagaagaggaagggggcggccgcgcacc
agaattgctctactgactcgacccaaacggaaacgaactccgaaggcccagcgagagggc
gtcgaccctcagtctcaagcccagacgcacatctgctgccagtggcgagaaacgttggcg
gacggcgccacggcgacatcccacagctgctgcgcccagaatggcacgcagctgacgtgc
gcggagtgccaacgtgtgttcgccgaccgggcggcgctgcggtcgcacgagtgtgtgctg
caggagggcgagggcctctacagctgcccccagtgcagcctgcccttcagccagccgtcc
aacctgcggcggcaccagcgcaccgtccacgcccttgtcaagccctactgctgcggccag
tgcggcaagttctacacgcaggccagcggcctcaagcgccaccaggaggggcgccagcac
aagcggaggcggctcgccagcgcctctgtcgtcgtcgccacggcgaccaccgccgcggcc
acgcccatctactcctgcgcctactgccagttctccttcaccgcccagcgctacctgcac
aagcacgtcaagcggcaccacccgactaagttcatccaggcgttagacggcgagccgcag
agggaggaggagcaggatgaggaggaggaagagggaggcggcggtgcccgggaggggttg
gcgcgggtggcgacgcaggcgcgggtgccccagagctgcccgcagtgcgagaaaaccttc
atcagcatcaaaggcttcaagtcgcaccgctgctttcgccgcggcgagaagacctacccg
tgcctcgtctgcgacaagggcttcaccagcttctacagcctgcgtcagcaccagcgcatc
cacacgggcgagaagccgcacgtctgcccgcactgctccaagagcttcgcggtggtaggc
cagctgaacgtgcacctgcgcacgcacacgggcgagcggccctacctgtgctcgcagtgc
ggcgagggcttccggcagtcgggcgacctgaagcggcacgagcagaagcacctgggcgtg
cggccgcacccgtgcccgcagtgccccaagagcttcagccgcccgcagagcctcagggcg
cacctgcagatccacagcggagagcgcctctaccgctgcgcccagtgcaacaagtccttt
acccgcgggtaccacctcacgcgacaccaccacaagatgcactccttacaggaacagcaa
gatggcagcaagaagaaatcaggccatgaaccataa
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