Clupea harengus (Atlantic herring): 105909748
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Entry
105909748 CDS
T09045
Symbol
alox5a
Name
(RefSeq) polyunsaturated fatty acid 5-lipoxygenase isoform X1
KO
K00461
arachidonate 5-lipoxygenase [EC:
1.13.11.34
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00590
Arachidonic acid metabolism
char01100
Metabolic pathways
char04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00590 Arachidonic acid metabolism
105909748 (alox5a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105909748 (alox5a)
Enzymes [BR:
char01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.34 arachidonate 5-lipoxygenase
105909748 (alox5a)
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Gene cluster
GFIT
Motif
Pfam:
Lipoxygenase
PLAT
RtcR
Motif
Other DBs
NCBI-GeneID:
105909748
NCBI-ProteinID:
XP_012693864
Ensembl:
ENSCHAG00000020632
UniProt:
A0A6P3WAP0
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Position
13:14379523..14389333
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AA seq
674 aa
AA seq
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MPSYTVTVATGSQWFAGTDDYIYVTLVGTERCSDRTLLDKPLYNDFERGAIDSYDISVGE
DLGDIELVKIEKKKYWFQDDWYCRFITVKNPTGDYLEFPCFRWLVDDKEVVLRDGKARLP
QVEKTPIAKQHRRKELETRQKLFRWKEWHPGFPMSIDAKAHRDLPRDIQFDSEKGVDFVL
NYSKAIENLAVNQFMHMFQSSWNDLADFEQIYMRIKNTISEYVMQHWKEDFMFGYQYLNG
CNPVIIQKCHKIPDKFPVSHDMVKDYLEREITLEEEVKAGNIFLADYDVMDGVTANSTDP
CTMQYLAAPVCLLYRNQRNKIMPLAIQLHQAPGEDNPIFLPSDAENDWLLAKVWVRSADF
HVHQTVTHLLRTHLISEVFGIAMFRQLPAVHPVYKLLYPHIRFTIAINTKAREQLICECG
LFDKANGTGGGGHVELIQRAMKTFTYKTLLFPESIKARGMESQEEIPYYFYRDDGIKVWE
MVKSFAADVVAIYYDSDKTLQEDEEIQAFVKDVCSFGMQDFDQCEFPKFLTTREQLTEYL
TVVIFTASAQHAAVNFGQYDWCSWIPNSPSTMRKPTPTKKGEADVKYIMESLPDRGRSCW
HLGAVWALSQFQDNELFLGMYPDEHFTEKPVKTAMENFRRKLSEYSRVVKARNEGKKLPY
YYLSPDRIPNSVAV
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcccagttacactgtcacggtggctacaggtagccagtggtttgccgggaccgatgac
tacatttacgtcaccctggttggaactgagagatgcagtgacaggaccctgctggataaa
cctctctacaatgactttgaaaggggagcgattgactcctatgatataagtgttggagaa
gaccttggtgacattgaactggtgaaaatcgagaagaagaaatattggttccaagatgat
tggtattgcagatttatcacagtgaagaacccaacaggagattatcttgagtttccatgc
tttcgatggctggttgatgacaaagaagttgtcctcagggatggcaaggctcgtttgcca
caggttgagaagaccccaatagcaaagcagcatcgacgtaaagaactggaaacaagacaa
aagcttttcagatggaaagagtggcacccaggctttccaatgagcatagatgccaaagcc
cacagagatctcccccgcgacatccagtttgacagtgagaagggcgtggacttcgttttg
aactacagtaaagcaatcgaaaacctggctgtgaaccagttcatgcatatgttccagtct
tcttggaatgacctggctgactttgaacagatatatatgaggatcaagaacaccatttca
gaatatgttatgcaacactggaaagaagacttcatgtttggataccagtatcttaatgga
tgcaaccctgtcatcatccagaaatgccacaaaatacccgacaagttcccagtgtctcat
gacatggtgaaggactacttggagcgggaaattactctcgaggaggaggtcaaggccgga
aacatttttcttgcagactacgatgtaatggatggtgtgacggcaaacagtacagaccct
tgcactatgcagtatctggctgctccagtctgtttattgtacagaaaccaacggaacaag
ataatgccattggccattcagctgcatcaggcccctggtgaggacaatcccatatttctc
ccgagtgatgctgaaaatgactggttgctcgcaaaggtatgggtgcgctccgctgatttc
catgtccaccaaactgtcactcatcttttgcgcactcacctgatctctgaggtcttcgga
attgccatgttccgccaacttcctgctgtccacccagtttacaagttgctctatccacac
atccgcttcacgatcgccatcaacaccaaggcacgggagcagctgatctgtgaatgtggg
ctctttgataaggccaacgggacaggaggagggggccatgttgaactgatccagagggcc
atgaaaaccttcacatacaaaacgctccttttcccagagtccatcaaagctaggggcatg
gagagccaggaggagatcccctactacttctacagggatgatggcatcaaggtctgggag
atggtcaaaagttttgcggcagatgtggtggccatttactatgacagtgataagactctc
caggaggatgaggaaattcaagcgtttgtgaaagatgtctgcagctttggaatgcaagac
ttcgaccaatgtgagtttccaaaattcttgacgaccagggagcaacttacagagtatctg
actgttgtgatcttcactgcttctgcacagcatgctgctgtgaactttggccagtatgac
tggtgctcctggattccaaattctccatcgaccatgcggaaacccacccctacgaagaag
ggcgaggccgatgtgaagtacattatggagagtctgcctgaccgcggacgctcctgttgg
catcttggggctgtgtgggccctcagccagttccaggataatgagttgtttttaggcatg
taccccgatgagcacttcactgagaagccagtgaagacggctatggagaacttccgcagg
aaactctcagaatattcccgggttgtgaaggccaggaatgaggggaagaagctgccatac
tactatctgtctccagacaggattccaaacagtgtagcagtttga
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