Clupea harengus (Atlantic herring): 105910301
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Entry
105910301 CDS
T09045
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00310
Lysine degradation
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
105910301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105910301
03036 Chromosome and associated proteins [BR:
char03036
]
105910301
Enzymes [BR:
char01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
105910301
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
105910301
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
105910301
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
105910301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_11
zf-C2HE
zf_PR_Knuckle
Zn-ribbon_8
Actin_micro
zf-LYAR
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
105910301
NCBI-ProteinID:
XP_031421329
UniProt:
A0A6P8F836
LinkDB
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Position
4:complement(3289163..3292070)
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AA seq
406 aa
AA seq
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MQCDFLFVLCVSGVSKRECLKQQKGQLNSYKRGGSLRSRPRVSYTEEEEPKDEDYLYCED
CESFYIDECGVHGPPNFIPDTPAPVGVPDRARLTLPPGLVVRESNIPNAGLGVFNQGQTV
PKRAHFGPYEGEVTDRDEAIESGYSWVTYKSRHVDEYIDAKRETHSNWMRYVNCARDGEE
QNLVAFQYRGGIVYRCCKPIAPGEELLVWYGEDYARDLGITFDYLWDIKSSAKEVSASQV
FSCSLCPFSYTAQIYLHKHIKRSHTDEYVRLLRSGEIRPETLAPSRSSDQHTQKHLTVPS
RSTSSEVAPNPSSQQEGANDKRSHHCTQCGKTFTGKTDLKLHQRTHTGERPYHCTQCGKS
FTDGGNLKLHQRTHTGERPYHCTQCGKNFTSTGQLKTHRCSHTKEP
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgtgattttctttttgtattatgtgtgtcaggagtgtcaaagagagagtgtttg
aaacagcagaaaggccagttgaacagctacaagcgtggaggcagcctgcgcagcagaccc
agagtgagctacacagaggaagaggagcccaaagatgaagattacctctactgtgaggac
tgtgagtctttctacattgatgagtgtggggtccatggcccccctaacttcatccccgac
accccagctcctgtaggggtcccagaccgagctagactcaccctgccacctggactggtg
gtcagagagtccaacatcccaaacgcaggtctgggggtgttcaaccagggtcagacggtg
cccaaaagggcgcactttggcccctatgagggagaggtgacggacagggacgaggccata
gagagcggatactcctgggtgacatacaagagccgacatgtagatgagtacatagacgca
aagagagaaactcactccaactggatgaggtatgtgaactgcgctcgtgacggtgaggag
cagaacctggtggcgtttcagtacagaggggggattgtgtatcgctgctgtaagcccatc
gcccctggagaggagctgctggtctggtatggagaggactacgccagagacctgggcatc
accttcgactacctgtgggacatcaagagtagcgccaaagaggtgtcggcgtctcaggtg
ttctcgtgctccttgtgtccgttttcctacacggctcaaatctacctccataagcacatc
aagaggagccacacggacgagtacgtgagactgctgaggtctggagagatcagaccagag
actttggcaccttccagaagcagtgaccaacacacacagaaacatttaactgtgccgtcc
aggtcaacatccagtgaagtcgcccctaacccctcttcacaacaggaaggagcgaatgac
aagagaagtcaccactgcactcagtgtggcaagacctttactggaaagacagatctcaaa
ctacaccagcgcactcacacaggagagaggccgtaccactgcactcagtgtggcaagagc
ttcactgatgggggaaatctcaaactacaccagcgcactcacacaggagagaggccgtac
cactgcactcagtgtggcaagaactttacttctacgggtcaattaaagacacaccggtgc
tctcacacgaaagagccctaa
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