Clupea harengus (Atlantic herring): 105913455
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Entry
105913455 CDS
T09045
Symbol
hdac10
Name
(RefSeq) polyamine deacetylase HDAC10 isoform X1
KO
K18671
histone deacetylase 10 [EC:
3.5.1.98
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105913455 (hdac10)
Enzymes [BR:
char01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105913455 (hdac10)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
105913455 (hdac10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
105913455
NCBI-ProteinID:
XP_031420826
Ensembl:
ENSCHAG00000021810
UniProt:
A0A6P8FA92
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All DBs
Position
3:complement(22340062..22345864)
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AA seq
683 aa
AA seq
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MASKTAVIYDEEMTRYKLLWVDPACKIEVPERLTASYEALLSKGLPKRCLSIPVRQATEE
EILLVHSEEYLEAVKQTPHMTLEDLMTFTQQYGDVYFHPNIFHCAKLAIGATLQLVDSVM
MGKVRNGIALVRPPGHHSQRSAANGFCVFNNVAIAALYAKKHYNVKRVLIVDWDVHHGQG
VQYCFEEDPSVLYFSWHRYEHQKFWPNLQESDYGNVGKGKGAGFNINVPWNKVGMNNSDY
LSVFFHVLLPVAYEFNPELVLVSAGFDSAIGDPEGHMCATPEIFGHLTHLLMSLAGGKLC
AVLEGGYHLTSLAQSVCQTVQTLLGDPAPLLTNLNSPCESALESLQNVRSAHQQYWTCFK
HSAVAAVLEPSTKRCRIGEDGGEEAQQDQVTGEAGDKTEEEVVWPEPLPRTSPPLRTAVA
LPPGVEDSLLPEGCQCLMEASQTTVGAVEKIRDELNVGEVKGERELMALRQVISLLDKVD
KKEIRNGLAVVPDISLAVKFAVQHALTSVDRVLVVFVGDEELPVDSDDERILLVQICSKK
PKSHKSQYYVPVCLKQGPGDVAGFLQAVLGLLLPMAYQHNPGLVLEVLAQGSGVKEAAWA
QLTSLLQGLALGHTLALLQESQEAPVRATAASLMGDPAPDLGTLEALSPESVQAIEREQK
RLEMKWGMLHTSVPAKKSQEQNK
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaagacggctgtaatttatgatgaggagatgacccgctacaaactcctctgg
gttgaccctgcttgtaaaattgaggtaccagaacgtcttactgccagttacgaggcactg
ctttctaagggcctgccgaagcgctgtctttccataccggttcgtcaagcaactgaggaa
gagatcctattggtgcacagtgaggagtatctagaggctgtcaaacagactccccacatg
acactggaggacctgatgacattcacccagcagtatggagatgtctatttccatccgaac
atcttccactgtgccaaactggcaataggggccaccctgcagttagtggacagtgtgatg
atgggaaaagtgaggaatggaatagcattagtcagaccccctggtcatcacagccaaagg
agtgctgccaacggcttctgtgttttcaataacgtggctattgctgcgctctatgccaag
aaacactacaatgttaaaagggtgctgattgttgactgggacgtgcatcatgggcaaggt
gttcagtactgttttgaggaggacccaagtgtactctacttctcttggcaccgctatgag
caccagaaattttggcccaatcttcaagaatcagattatggcaacgtgggaaagggaaaa
ggagcaggattcaatatcaatgtgccgtggaataaggtgggaatgaacaacagtgactac
ctctctgtcttcttccatgtgctactgccagttgcatatgagttcaaccctgagctagtt
ctggtttcagcaggctttgactctgcaataggggatccagagggtcacatgtgtgccact
ccagagatctttggtcatctcacccacctactgatgtccctggcaggtggcaagttgtgc
gcagtccttgagggtgggtaccacttgacgtcgcttgcccagtcagtgtgccaaaccgtg
cagacccttctcggagatcctgctcctctgttgaccaacttgaactccccttgtgagagt
gcactggagtctcttcagaatgtgagatctgcacatcaacagtactggacttgctttaaa
cactctgcagtggctgcagtcttagagcccagcactaaacgctgcaggataggggaagat
gggggtgaagaagcccagcaggatcaggtgactggagaagcaggagataagaccgaggag
gaagtggtctggcctgagcctctacctaggacaagccctcctctgcgcacggctgtagcg
ctcccccctggtgtggaggactccctgctgccagagggctgtcagtgcttaatggaggca
tcacaaactactgttggagcagtagagaagattagagatgagcttaatgtaggagaggtg
aaaggtgaaagggagttgatggccctcagacaagtgatctcacttttggacaaagtggat
aagaaagagatccgcaatggtttggcagtggtgccagatatatccctggctgtgaaattt
gctgttcagcatgcactaacctccgttgaccgggtcctggtggtatttgttggagatgag
gagctgccagtggattcagatgatgagagaatcctcctggttcagatctgcagtaaaaag
cctaaatcccataaatcccagtactatgttccagtatgcttgaagcaaggtcctggtgac
gtggccgggtttctgcaggctgtgctgggcctactgctgcccatggcataccagcacaac
ccaggcctggtcctcgaggtcctggcacagggcagcggggtgaaggaggcagcgtgggca
cagctcaccagcctgctccagggcctcgcgctggggcacacactggccctgctacaggaa
tctcaggaggcccctgtgagggccactgcagcctctctgatgggggaccctgcccctgac
ctagggactctggaggccctctcccctgagagtgtccaggccatagagagagagcagaag
agactggagatgaagtggggaatgctgcacacatcagttcctgccaagaaatctcaggag
caaaacaaatga
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