Clupea harengus (Atlantic herring): 116217910
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Entry
116217910 CDS
T09045
Name
(RefSeq) carcinoembryonic antigen-related cell adhesion molecule 5-like isoform X1
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
116217910
04147 Exosome [BR:
char04147
]
116217910
04090 CD molecules [BR:
char04090
]
116217910
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
char00537
]
116217910
Cilium and associated proteins [BR:
char03037
]
Other cilia and associated proteins
Stereociliary proteins
116217910
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116217910
Exosomal proteins of bladder cancer cells
116217910
CD molecules [BR:
char04090
]
Proteins
116217910
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
char00537
]
Antigens
116217910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_5
Ig_4
C2-set
C2-set_2
BiPBP_C
DUF6040
Motif
Other DBs
NCBI-GeneID:
116217910
NCBI-ProteinID:
XP_031432497
UniProt:
A0A6P8GAA9
LinkDB
All DBs
Position
11:2382959..2454442
Genome browser
AA seq
512 aa
AA seq
DB search
MDSHALLTVGILSAIGFCSCKNELLLNGPLDGAVGGSVEFTLINPPSPPPNLITWRFTGY
TENIIVNSFSGGNETHVDYVGRISVNKTTASLKLRGLTHNDTGRYSVSFLISGVGYQGGT
SLTVFDKISNVKAEANQHELVEFNSSVILTCSASGSYPSFRWFNRSADVTGSDNRTLTVV
NVTRYDTGPFQCEASNAINVEMSSEVNLTIAYGPDSAVVTVKPPDSFYSSGSDITLSCSS
ESKPAAQFQWALNGTLLGREGPELRLENVQASQSGAYSCRAYNSKTHRSETSSPSTITVL
ERISGAAITSTGGVWIECKSSVILTCDAQGSIITREWRKDGNPLHGVNIDELNRTVSISP
LKKEDKGYYTCQVSNPVSSETASKGLIVNCPLPPWVIVIIVIGVLIGVTAVIGISIFLLK
KKGKLGLPMGRQAPPQNNASTELDYADISHFQKRNGQKEDLGNGGDGGDGGVAAATIYAA
VKLPRSTGPNPGQAPGPPNQVPDVTYAQVKKK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggattctcacgctttactcaccgtagggatactatcagcaatcggattttgctcgtgc
aaaaatgagttactactgaatggacctctggatggagcagtaggagggagtgtggagttc
accctcattaacccaccatctccaccacctaatttaatcacctggaggtttactggatat
acagagaatataatcgttaattccttcagtggtggaaatgaaacacatgttgattatgtt
ggcagaatctctgtgaacaaaaccacagcttcactgaagctcaggggcctgactcacaat
gacactgggcggtacagtgtgagcttcctcatcagtggtgtaggataccagggaggcaca
tcactgacagtgtttgacaaaatctccaatgtgaaagcagaggccaatcagcatgagttg
gtggagttcaacagctctgtcatcctcacatgctccgcctctggctcctacccctcattt
cgttggtttaacaggagtgctgatgtcacaggaagtgacaacagaaccctcactgttgtg
aatgtgactagatatgatactgggccattccagtgtgaagcatccaatgctatcaatgtc
gaaatgagctccgaggtcaatctgaccattgcttatggcccagatagtgcagtagtaaca
gtgaaacctccagactcattctacagctcaggctctgacatcaccctgtcctgctcttct
gagtccaagcctgctgcccagttccagtgggctctgaatggaaccctgctgggtagagag
ggaccagaactcagactggagaacgttcaggccagtcagagcggtgcctacagctgccgg
gcctataatagtaaaacccacaggtctgaaacatcatcaccatcaacaatcactgtgctt
gagagaatctctggtgctgccattacaagtactggtggcgtctggatagaatgtaagagt
tctgtcatcttaacctgcgatgcacagggctccatcatcaccagagagtggagaaaggat
ggtaatcctctgcatggagttaacatcgatgagctcaacagaacagtttccatcagccca
ctaaagaaagaagacaaaggatactacacatgtcaagtcagcaaccctgtcagctctgag
accgcctctaaaggactgattgtgaactgtccattgccgccttgggttatagtcataata
gtaataggagtgttaataggagttacagctgtgattggaatttccatctttctattgaag
aaaaaagggaaactgggccttccaatgggtcgacaagcacctccacaaaataatgcttca
acagaacttgactatgcagatatcagccactttcagaaaagaaatgggcagaaggaggat
ctgggaaatggaggagacggaggagatggaggagtagccgcggcaacgatatatgcagca
gtcaaactcccaaggtctactggtcccaacccaggccaggctcctggaccacccaaccag
gtaccagatgtgacgtatgctcaggtgaaaaagaaatga
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