Clupea harengus (Atlantic herring): 116220349
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Entry
116220349 CDS
T09045
Name
(RefSeq) sialidase-3-like
KO
K12357
sialidase-2/3/4 [EC:
3.2.1.18
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00511
Other glycan degradation
char00600
Sphingolipid metabolism
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
116220349
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
116220349
Enzymes [BR:
char01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
116220349
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Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
Motif
Other DBs
NCBI-GeneID:
116220349
NCBI-ProteinID:
XP_031422725
Ensembl:
ENSCHAG00000006736
UniProt:
A0A6P8FGJ5
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All DBs
Position
4:25788918..25792704
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AA seq
395 aa
AA seq
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MGCSATKCCATKCCCGETVVDKSSCGETLVFADKNYDFRIPALLYVKEWNTFLAFAEKRT
STNDADATYLVMRKGTWQPDCSLQWFPRVDLMKATILGYRTMNPCPVFERNSKTLFLFFI
CIEGNTLEWNLRPGQTRLCYVTSTDCGETWSDLTDLTSSVMDSSFTNYQTFAVGPGHGIQ
LSSGQLLVPAYVKKVKSGESVKTHSLVLRREDQHTWKAGQPITLESGECQLAEVSDGEGS
TQVFLNARSTGAPEPRVEALSDDGGASFTLLNQLTLEERPHGCQGSVLGFPASDIPAGGG
GSSETALLFSHPTATTKGKDWDRLDLGVYLRKSLQDDNPWGKPHIIHEGASGYSDLTCCE
EEGHFGCLMECGHGERLQIVFKEINHSDVDRGEAV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagtgccactaaatgctgtgccactaaatgctgctgcggtgaaacagttgtt
gataaatcctcctgcggtgaaacacttgtgtttgctgataaaaactatgacttcagaatt
ccagctcttctttacgttaaagaatggaacacattcctggcatttgcagagaagcgcacc
tctaccaacgatgcagacgcaacgtatctggtgatgaggaaaggcacgtggcagcctgac
tgctcactgcagtggtttcctagagtggacttgatgaaggcaacaatacttggctaccgc
accatgaacccctgtccagtctttgaaaggaactcaaaaacactgtttctgttcttcatc
tgcatcgagggtaacactctggaatggaacctcaggccaggccagactcgtttatgctac
gtcaccagcacagactgcggggagacctggagcgatttaacagacttaacgagtagtgtc
atggacagcagctttaccaattaccaaaccttcgctgtgggaccgggccacgggatccag
ctgagcagcggccaactgctcgtgcctgcctatgtgaagaaggtaaagtctggtgagagt
gtgaagacccattctttggtgctgcgcagagaggaccagcacacctggaaggcaggccag
cccatcaccttggagtccggggagtgccagctggctgaggtgtctgacggggagggtagt
acgcaggtgtttctgaacgctcgcagcaccggagcaccggagccacgggtagaggcactg
agtgacgacggcggggcaagttttaccctgctaaaccagctaacgctagaggagaggcct
cacggctgccaggggagtgtgttggggttccctgccagtgacataccagcaggaggaggg
ggatcctcagagacggctctgctcttcagccacccgaccgcaacgaccaaagggaaggac
tgggacaggctggacctcggggtctacctgaggaagtctctccaggacgacaacccctgg
ggtaaaccccacatcatccacgagggggccagtggctactcagacctcacctgctgtgag
gaggagggtcactttggttgtctgatggagtgtggccatggggaacgtcttcagattgtc
ttcaaagagatcaatcattcagatgtagacagaggggaagctgtgtga
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