Clupea harengus (Atlantic herring): 116222930
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Entry
116222930 CDS
T09045
Name
(RefSeq) interleukin-1 beta-like isoform X1
KO
K04519
interleukin 1 beta
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04060
Cytokine-cytokine receptor interaction
char04217
Necroptosis
char04620
Toll-like receptor signaling pathway
char04621
NOD-like receptor signaling pathway
char04623
Cytosolic DNA-sensing pathway
char04625
C-type lectin receptor signaling pathway
char05132
Salmonella infection
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116222930
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116222930
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
116222930
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116222930
04621 NOD-like receptor signaling pathway
116222930
04623 Cytosolic DNA-sensing pathway
116222930
04625 C-type lectin receptor signaling pathway
116222930
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116222930
09171 Infectious disease: bacterial
05132 Salmonella infection
116222930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
char04052
]
116222930
00536 Glycosaminoglycan binding proteins [BR:
char00536
]
116222930
Cytokines and neuropeptides [BR:
char04052
]
Cytokines
Interleukins
116222930
Glycosaminoglycan binding proteins [BR:
char00536
]
Heparan sulfate / Heparin
Cytokines
116222930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL1
IL1_propep
PACT_coil_coil
Motif
Other DBs
NCBI-GeneID:
116222930
NCBI-ProteinID:
XP_031434077
UniProt:
A0A6P8GF11
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All DBs
Position
12:complement(10715274..10718472)
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AA seq
273 aa
AA seq
DB search
MADTYFSLADALESSYKPDSVEIDSCMCCCQMVKTSDQDSECGLHSGIDLEVSEQPQNLR
NVVNLVIALHRMKKTQKVQSTEFTDDELCNIFLENLVEEYVTPTVHEETHQAADHYNYIG
PVQKCYICDEFQKSLVLSKSITTELQAITLQGNNLSRRVELELSTYKASVPRERGQPIAL
GVGGNLYLSCTSTSGKPVLGLEMVNKEDLNNISGDMKRFLFFKTVSGQTLTSFESAKFEG
HYISTSYTNRQRVDMSLTKDAPNRLTSFKMTVL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacgtacttcagtttggctgacgctttggaaagcagctacaagcccgactct
gtggaaattgactcttgtatgtgctgctgtcaaatggtcaagacaagtgaccaagattca
gagtgtggcctgcattcaggaatcgacctggaggtgtccgaacagccccagaacttgcgt
aatgtggtcaacctcgtcattgccttgcaccgcatgaagaaaacccagaaagtgcagagc
accgagtttaccgacgatgagctatgcaacatattcttggagaatttggtggaagagtat
gtgacgccgacagtccatgaagaaactcaccaggctgccgaccactacaactacataggt
ccggtccaaaagtgctacatctgtgacgagttccagaagagcctggttctgagtaaaagc
atcaccaccgaactgcaggccatcacacttcagggaaacaacttgagcagaagagtggaa
ctggaactgtccacatacaaagcctctgtcccacgtgagaggggccagcctatcgccttg
ggggtggggggcaacctctacctttcatgcacatctacctcggggaaacctgtcctgggc
ctggagatggtgaacaaggaggacctgaataacatcagtggcgacatgaagcgtttcctg
ttcttcaagacggtcagtggccaaacattgaccagcttcgagtcggccaagttcgagggc
cattacatcagcacgtcctacactaatagacagcgtgtggacatgtccttgactaaggac
gcacccaaccgtctgacatcgttcaagatgaccgtcctgtga
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