Clupea harengus (Atlantic herring): 116224673
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Entry
116224673 CDS
T09045
Symbol
nectin4a
Name
(RefSeq) nectin-4
KO
K06593
poliovirus receptor-related 4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
char04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
116224673 (nectin4a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116224673 (nectin4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
116224673 (nectin4a)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
Nectin family
116224673 (nectin4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
Ig_2
ig
C2-set_2
TMEM154
Protocadherin
DUF5305
Nucleoside_tran
Shisa
Neur_chan_memb
DUF6377
Baculo_11_kDa
DNER_C
DAG1
EzrA
PRIMA1
Motif
Other DBs
NCBI-GeneID:
116224673
NCBI-ProteinID:
XP_031441063
UniProt:
A0A6P8GQR8
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All DBs
Position
18:14947644..14971152
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AA seq
625 aa
AA seq
DB search
MMLSSRITLRLCVYGTLMVCVLGESLLPLISAVPQRTLAEAETRLPCRYSGEDKVVQVGW
SRVRANGDIEQIIIYDFTEGVKEFTEFVNKMRFETLKPVKDLTLLILSTEESDEATYSCR
ITTFPSGTTESKIQLTVWTRPISILEPVVLVEGQSYRQAASCRSVGRPQPRVTWDTDLAG
HPQNRSVDARTVSGQFSLHPLRNLNGRQLDCLVWHPTFDTPFRISNRLVVHYPPDVSIGR
LKGDWYVGLEDAELNCVSGGNPKPNNFTWSRKGGSLPEGVELTPEGTLKFGRALSQSDDG
IYQCTASNSVGSGRAEMEIKVAGSVQKEASVDTFLIIIIGCVAVALVIILVIVVITVNQY
HKRKNKRLAMELHERREEISTLSRQASFRRMNSVSTDRYPMDEIMPLRVEGTLRNSLSSL
DRPRSRDSRSTMGGAVDTLGRPVIYNTSRRGRDSRMSRDLEREREREDNRHRVESYVRNS
SASLFHPPLHPSPTVMDQTAEIVKPVNGSAIPTLEGRLRSAVSTLGRNQAGSTLISMYPP
LTDEEEEEEEERVRCLGLEEDESDFLQVTNTNGLENHGSETNSSQMSETLSSPYEQSNGS
LRIKTRPNGSLLPPPMPLLQKAHVV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtcaagccgaattacactaaggctgtgcgtctatggaacactgatggtgtgt
gttttgggggagtctttgctgcccctcatctctgcggtcccccagcgaactctggcagag
gcggagacgcggttgccatgccgatacagcggggaagataaggtggtacaggtgggatgg
agccgagtgagggccaacggcgacatcgaacagatcatcatctacgactttactgagggt
gtaaaagagtttacagagtttgtgaataagatgcgtttcgagacccttaagcccgtgaag
gacttgacgcttctcatcctgagcacagaggagtcagacgaggccacctacagctgcagg
atcaccaccttcccctcggggaccactgagtccaagatacagctcaccgtctggactcgg
cccatctccatcctggagcccgtggtgctggtagagggccaatcctaccgacaggcagct
tcctgccgctccgtgggtcggccccagcctcgggtcacctgggatacggacctggccggc
catcctcagaaccgcagcgtggacgccaggaccgtctccggccagttctccctgcacccc
cttcgcaacctcaacgggcgccagctcgactgcctggtgtggcaccccaccttcgacacc
cccttcaggatcagcaatcgcttggtggtgcactaccctcctgatgtgtcgatcgggcgc
ctcaaaggggactggtacgttgggttggaggacgcagagctcaattgtgtcagtggagga
aacccaaaacccaacaacttcacctggtccaggaaaggcgggtctctgcctgagggggtg
gagttgactcctgaaggcacgctgaagtttggcagggctctcagccaatcagatgatggg
atataccagtgcaccgcttccaacagtgtgggctctggcagggctgagatggagatcaaa
gtggcaggttccgttcagaaggaggcgagcgtggatactttcctgatcatcatcataggc
tgcgttgctgtggcgctggtgatcatcttggtgattgttgtcataacagtgaaccagtac
cataagaggaagaacaaacggctggccatggagctccatgagaggagggaggagatcagc
actctctcaagacaagcttccttcagaaggatgaactccgtcagcacagaccgatacccg
atggatgagattatgccgcttagagtggagggaactttgcggaacagcctctcctccttg
gaccgtcctcgttctcgggacagccgctccacgatgggtggggcagtggacactttgggt
cgtccggtcatctacaacacatcccgacgaggccgtgattcacggatgagccgagacctg
gagagggagcgggagagagaggacaaccggcaccgcgtggagtcctacgtgagaaacagc
agcgcctctctgttccaccctccgctgcacccctctcctactgtgatggaccagactgct
gagatagtgaagcctgtaaacggcagcgccattccaacactagaggggaggcttcgctcg
gcagtcagcaccctcggcaggaaccaggccggctctacgctcatctccatgtacccgccg
ctgaccgacgaggaagaggaagaggaggaggagcgagtgagatgtctggggctcgaggag
gacgagtcggacttcctgcaggttaccaacactaatggtcttgagaaccacggcagtgag
accaacagctcccagatgtccgagacgctgtccagcccgtatgagcagagcaacgggtcg
ctcagaatcaagaccaggcccaacgggtctctgctgccgccgcccatgcctctcctgcag
aaggcccatgtcgtctag
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