Clupea harengus (Atlantic herring): 116224724
Help
Entry
116224724 CDS
T09045
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00310
Lysine degradation
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116224724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
116224724
03036 Chromosome and associated proteins [BR:
char03036
]
116224724
Enzymes [BR:
char01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
116224724
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116224724
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
116224724
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116224724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_11
Zn-ribbon_8
zf-C2HE
zf-LYAR
FYVE
BDHCT_assoc
zf-C2H2_jaz
zf-C2H2_6
zf_PR_Knuckle
KRAB
C1_4
Motif
Other DBs
NCBI-GeneID:
116224724
NCBI-ProteinID:
XP_042566439
UniProt:
A0A8M1KXX3
LinkDB
All DBs
Position
18:367291..377858
Genome browser
AA seq
594 aa
AA seq
DB search
MHFTQTEWARLAEWEKVRFKNMKRNHLAMLAIGLSSTPPAFMKKGRARRETLARAPTADS
TDSDEEWTPSLERRPPVSKREWLKQQNGQLNSYKRGGSLRSRPRVSYTEEEEPKDEDYLY
CEDCESFYIDECGVHGPPNFIPDTPAPIGVPDRARLTLPPGLVVSESNIPNAGLGVFNQG
QTVPRGAHFGPYEGEVMDRDEAIESGYSWVTYKSRHVDEYIDAKRETHSNWMRYVNCARD
GEEQNLVAFQYRGGIVYRCGKTIAPGEELLVWYGEDYARDLGITFDYLWDIKSSAKGTSQ
YDENIEMNDKVSASQVFSCSLCLFSYTAQIYLHKHIKRSHTDEYVRLLRSGEIRPETLAP
SRSGAQHKQKHLTVPSRSTSSKVAPNPSSQQEGANDKRSHHCTQCGKTFTREAHLKQHQR
THTGERPYHCTQCGKSFTEGGSLKLHQRTHTGERPYHCTQCGKSFTVGGNLKRHQRTHTG
ERPYHCTQCGKSFTLEGTLKLHQRIHIGERPYHCTQCGKTFTQEHHLKLHQRTHTGERPY
HCTQCGKSFTQEGTLKAHQRTHTGERPYHCTQCGKTFTSTGQLKTHRCTHTKEP
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcacgcagaccgagtgggcgcggctggccgaatgggagaaggtgcgcttcaaa
aacatgaagaggaaccacctggccatgctggccataggtttgtcctccactcctccagcc
ttcatgaagaagggccgggccagaagggagacgttggcgagagcacccactgctgacagc
accgactcagatgaagagtggacacccagtttggagaggagacctccagtgtcaaagaga
gagtggttgaaacagcagaatggccagttgaacagctacaagcgtggaggcagcctgcgc
agcagacccagagtgagctacacagaggaagaggagcccaaagatgaagattacctctac
tgtgaggactgtgagtctttctacattgatgagtgtggggtccatggcccccctaacttc
atccctgacaccccagctcctataggggtcccagaccgagccagactcaccctgccacct
ggactggtggtcagcgagtccaacattccaaacgcaggtctgggggtgttcaaccagggt
cagacggtgcccagaggggcgcactttggcccctatgagggagaggtgatggacagggac
gaggccatagagagcggatactcctgggtgacatacaagagccgacatgtagatgagtac
atagacgcaaagagagaaactcactccaactggatgaggtatgtgaactgcgctcgtgac
ggtgaggagcagaacctggtggcgtttcagtacagaggggggattgtgtatcgctgcggt
aagaccatcgcccctggagaggagctgctggtctggtatggagaggactacgccagagac
ctgggcatcaccttcgactacctgtgggacatcaagagtagcgccaaaggtacatcacaa
tatgatgagaatattgaaatgaatgacaaggtgtcggcgtctcaggtgttctcgtgctcc
ttgtgtctgttttcctacacggctcaaatctacctccacaagcacatcaagaggagccac
acggacgagtacgtgcgactgctgaggtctggagagatcagaccagagactttggcacct
tccagaagcggtgcccaacacaaacaaaaacatttaactgtgccgtccaggtcaacatcc
agtaaagtcgcccctaacccctcttcacaacaggaaggagcgaatgacaagagaagtcac
cactgcactcagtgtggcaagacctttactcgagaggcacatctcaaacaacaccagcgc
actcacacaggagagaggccgtaccactgcactcagtgtggcaagagctttactgagggg
ggaagtctcaaactacaccagcgcactcacacaggagagaggccgtaccattgcactcag
tgtggcaagagcttcactgttgggggaaatctgaaacgacaccagcgcactcacacagga
gagaggccgtaccactgcactcagtgtggcaagagctttactctagagggaactctcaaa
ctacaccagcgcattcacataggagagaggccgtaccactgcactcagtgtggcaagacc
tttactcaagagcatcatctcaaactacaccagcgcactcacacaggagagaggccgtac
cactgcactcagtgtggcaagagctttactcaagagggaactctcaaagcacaccagcgc
actcacacaggagagaggccgtaccactgcactcagtgtggcaagacctttacttctacg
ggtcaattaaagacacaccggtgcactcacacgaaagagccctaa
DBGET
integrated database retrieval system
