Clupea harengus (Atlantic herring): 122131876
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Entry
122131876 CDS
T09045
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122131876 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
122131876 (polr1b)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122131876 (polr1b)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
122131876 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
122131876
NCBI-ProteinID:
XP_042562526
UniProt:
A0A8M1KEP6
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MDYSTKWSNLSSAPSLKNLTEPGFGVPKEQQHAAVQDLVKAHLESFDHAVTDGLCRALQA
IPPLEFTFRNDRIALAFVEASIHNPMASKGSICKDTRVFPAECRGRRCTYRGRLVADVSW
SVNGVPKGIIKQSLGVVPIMVKSKLCNLHGLSPKELIDHHEEAEEMGGYFIVNGIEKVIR
ILIMQRRNYPIAMSRPKWKSRGQGYTQYGISMHCVKEEHTAINMNLHYLDNGTVMLNFIF
QKELFFIPLGFALKALVDFTDFQIYQELIKGLEDNSFYKSCVSQMLRVVMEKGCTTKEKV
LRYLGERFRVKMSLPEWYTHEQCAHYLLDECLCIHLKSDVEKFYQLCLMTRKLFVFAKEG
CMEENPDSLMCQEVITPGQLYLMFLKERLTAWLYSVKIALDKRGHRVPVDLSSEALMKMF
NMGTDLTKPFEYLLATGNLHSKTGLGMLQNTGLCVVADKLNFVRYLSHFRCVHRGAAFAK
MRTTSVRRLLPESWGFLCPVHTPDGEPCGLMNHMTAHCEIVAPSLSTTTLPALLCSLGVT
PVDATPSQPYSDCYPVLLDGALVGWVEKELAPALAESLRRFKVLKEKRVPPWTEIVLVPQ
TGKASMYPGLFLFTTPCRMVRPVRNLALGKQELIGAFEQLFINVGIFGDEIEEGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSYKERSDNKLYRLQTPQSP
LVRPVMYDHYNMDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGCVYKTELVD
LSEKVKGEDGVVFGVQPGDAKVMNHLDADGLPHIGTTLHYGDPFYSHINLNTGKGYVTYY
KSQESCVVDNIKVCSNDVGTGRFKRVCITVRVPRNPTIGDKFASRHGQKGILSRLWPTED
MPFSESGMTPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFNFSEEHSALGY
FGDSLRAAGYNYYGTERLYSGISGLELEADIFVGVVYYQRLRHMVSDKFQVRTTGGRDKV
TQQPLGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCMDCGSLLSPLL
EKPPPSWSATRCRRTVCTLCGKSDAIDTIAVPYVFRYFVAELAAMNIKIKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggattactccacgaagtggagtaatttatcctctgcaccaagtttaaaaaacctaacc
gaaccggggtttggtgtccccaaagaacaacaacatgctgcagtacaggaccttgtaaaa
gcacacttagagtcgtttgatcatgcggtcaccgatggactgtgccgggctttacaggcc
atcccacctttggagtttacattcaggaatgataggattgctttggctttcgtcgaagca
tccatacacaatccaatggcaagtaaaggaagcatctgcaaagacacgcgagtcttcccg
gcggagtgtcgaggcaggcgctgcacctaccgagggaggcttgtggctgatgttagctgg
tcagtaaatggcgttccaaaaggcatcatcaagcagtcactaggcgttgtgcctattatg
gtgaagtctaagttgtgtaacctgcatggactttcaccaaaggaactcattgaccaccat
gaagaggcagaggagatgggcgggtattttattgtgaatggcatcgagaaggtcatccgt
attctcatcatgcaaaggaggaactacccaatagccatgtcacgacccaagtggaagagt
cgaggacagggatacacacagtacggtatttcgatgcactgtgtgaaagaggagcataca
gccatcaacatgaacttacattatctagacaatggcacagtgatgctgaacttcatcttt
cagaaagagctctttttcattcccctgggttttgcactgaaggcactggtggacttcaca
gacttccagatctatcaggagttgatcaagggcctggaggataactccttctacaagagc
tgtgtctcccagatgctgcgcgtggtcatggagaagggctgcaccaccaaggagaaggtg
ctccgctatctgggcgaacgcttccgggtcaagatgagcctaccggagtggtacacccat
gagcagtgtgcccactacttactagatgagtgtctatgcatccacttgaagtcagacgtg
gagaaattttaccagctgtgcctgatgacccggaagttgtttgtcttcgccaaagaagga
tgcatggaagagaaccccgacagtctgatgtgtcaggaggtcatcactccaggccagctc
tacctcatgttcctcaaggagagattgactgcctggctatattcagtgaaaattgccttg
gacaagagaggccacagggtgccagttgacctctcctccgaggccttgatgaagatgttc
aacatgggcacagacctcaccaagccttttgagtaccttctggccactggaaacctccat
tcaaagacgggcctgggaatgctccagaacacgggcctgtgcgtggtggccgacaagctg
aactttgtgcgctacctgtcgcacttccgctgcgtgcacagaggtgctgccttcgccaag
atgaggaccacgtcggtgcgtcggctgctgcccgaatcctggggcttcctgtgccccgtg
cacacgcctgacggcgagccctgtggtctgatgaaccacatgaccgcccactgcgagatc
gtggccccttccctctccaccaccacgctccccgccctgctctgctctctcggagtgaca
ccagtagatgccacccctagtcagccatattcggattgctaccctgtgctcctagacgga
gcccttgtgggctgggtggagaaggaactggcacctgctttggcagagtccctccgcagg
ttcaaggtgctgaaggagaagcgagtacctccctggactgagattgtcctggttcctcag
acaggcaaggccagcatgtaccctggcctcttcctcttcaccacgccctgccgtatggtg
cggcctgtgcgtaaccttgccctgggcaagcaggaactcattggggcctttgagcagctc
ttcatcaatgtgggcatatttggggatgagattgaagaaggggtcacgacacaccaagaa
ctgttccctcacagcatgctgagtgtggtggccaacttcatcccttactcagaccacaac
cagagtcccagaaacatgtaccagtgtcagatgggtaaacagactatgggcttccctctc
cattcatataaagaacgttcagacaacaaactctaccgtctgcagaccccccagagtccg
ctggtacgaccagtcatgtatgatcattacaacatggacaattatcccatcggtaccaac
gccattgtggccgtgatctcctatacaggttacgacatggaggacgctatgattgtgaac
aagtcatcatgggagaggggcttcgcccatggctgtgtgtacaagaccgagttggtggac
ctctctgagaaggtgaagggtgaggatggtgtggtgtttggggttcagccaggagacgcc
aaggtcatgaaccacctagatgctgatgggctaccacatatcggcaccacactacactac
ggagatcccttctacagtcatattaacctcaacactggcaagggttatgtgacctactac
aagagtcaggaaagctgtgtagtggacaacataaaagtgtgcagtaacgacgtgggtacg
ggccgcttcaagcgcgtgtgcatcacggtgcgtgttcctcgcaaccccaccatcggcgac
aagtttgccagccgccacggccagaagggcatcttgagccgcctgtggccgaccgaggac
atgcccttcagtgagagcggcatgactcccgacatcctgttcaacccccatggcttcccg
tcccgcatgaccatcggcatgctcatcgagagcatggcggggaaatcggccgcgctccac
ggcctatgccacgacgccacgcccttcaacttctccgaggagcactcggccctcggctac
ttcggcgactcgttgcgtgccgctggctacaactactatggcaccgaaaggctatacagc
ggcatcagcggcctggagctggaggccgacatctttgtgggcgtggtgtactaccagcgc
ctgcgtcacatggtctcagacaagttccaggtgcggaccacgggcgggcgcgacaaagtc
acccagcagccgttaggcggcaggaacatccagggcggtatccgcttcggagagatggag
agggacgcgctgctggcccacggctcatccttcctgctgcacgaccgcctcttcaactgc
tcagaccgttcggtcgcgcaggtgtgtatggactgtggcagcctgttgtcgccccttctg
gagaagccgccgccatcttggtcagccacacgatgccgcaggactgtatgcactctgtgt
ggcaaaagtgacgccatcgacacgattgctgtgccttacgttttccgctactttgtggca
gaattggcagccatgaacatcaaaatcaagcttgacgtaaagtag
DBGET
integrated database retrieval system
