Clupea harengus (Atlantic herring): 122132974
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Entry
122132974 CDS
T09045
Name
(RefSeq) LOW QUALITY PROTEIN: cell migration-inducing and hyaluronan-binding protein-like
KO
K19031
cell migration-inducing and hyaluronan-binding protein [EC:
3.2.1.35
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
char00536
]
122132974
Enzymes [BR:
char01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
122132974
Glycosaminoglycan binding proteins [BR:
char00536
]
Hyaluronan
Cell surface receptors
122132974
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
G8
ILEI
Mucin2_WxxW
Motif
Other DBs
NCBI-GeneID:
122132974
NCBI-ProteinID:
XP_042564039
UniProt:
A0A8M1KQT7
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Position
6:complement(30223437..30288676)
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AA seq
1244 aa
AA seq
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MTMKSCVALLLATLPIIHAVCPDKEPGLQPWTPGHSEAHRVTIGYGRKVLLTSSCTVHSI
EILNGGKLVIADTNRPVVLRAKHILIGNKGELHIGSPDCPYKGSLTISLFGRSDDTDIGH
SYFGRKYVGVGTGGTLEVHGAKKLSWTFLNKTLHPGEANENSYHFEKGWGNRGIIVHVID
PSTGQVLHNDRFDTYRSKDESRRLAQHVAAMEDGMILAMVVNDEGSNNLEDTAKKALTRL
GSRELTRLGFRHPWSFITVKGDSSSALEDRAIYQGTKASSEAKSSRIFQTGYGEHFAVTT
SSQWVQEADWTDWFDRDDERGSGDWEKLSDLHKAFPERLCSNPLDMEAETHDGIPANMTG
EIFSKNDKIYGFVCLNKDQPDGLCHNYRVRFLCGKLVRPQASITVDMLSNSSILELADEA
RGWRAGDRVVVASTDYSMLQAEEFDLLPCPACALNQVKVQGKPTFVHMGEEVDGVDMRAE
VGLLTRNVLIRGEMEPACYGNEACKFFDFDTFGGHLKVRTGLSAVHVEGVEXKHMGQQSM
GHYPXHFHMNGDVDEKGGYNXPTYVRDLSIHXHFSRVSLWHGSNGLVKDIVGYEALGHCF
FTEDGPEERNTFDHCLGLLVRAGTLLPSDRDSKMCRHITNGAFPGYVAKPRQDCSATSTF
WMANPNNNLINCAAAGSEETGFWFIFHHVPTGPSEGMYSPGRTEHTPMGQFINNRAHSNY
RAGMILDNGVKTTEANAKDKRPFLSLVGARYGPHQDADPFKPRVPALIHHFVAYKNEDHG
AWLRGGDVWLDDCQFADNGIGLTLASGGTFPDDDGSRQQVKNSLFVGESANRGMPTPMNS
IWGPGGADLSERSLPRGVNFPIRGMQIYDGPINVQNCTFRKYMALDGRHTSAFGFRLNNS
WQSCPNNNVTDITFDDVPITSRVFFGEPGPWFNQMQMDGDKTTIFHDVDGSVSEYPGAFL
VKEDNWLLRHPDCIDVPDWRAAICSGHYAQIYVQTRNPANLDMTMVKNEYPERPLKLVGA
LGKRNHYQQFQPVVTLAKGYTMHWDQAAPAEVTIWLINFNRGDWINVGICYPRGTAFVVI
SDIHNRLTKETRKTGVFMRTMDREKMGHTHQSRGYYYWEEDTGLLFLKARAHNEKDDYAF
CSVKGCERVKIKAIIPKGSGPSDCMAEAYPRHTEMPIVNVPMPKKLARFNVVRFLLPSSL
SSCMTTSCSTRQQVSASHYEFELLQFSIPFFFSFTQRPLQLTLS
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaagagctgtgtcgctctcctgcttgccaccctgcccatcattcatgctgtg
tgtcctgacaaagagccgggcctgcagccgtggacccccggccatagcgaggcccaccgt
gtcaccatcggttacggccgcaaagtcctcctcaccagctcatgcaccgtccactccata
gagatcctcaatgggggaaagcttgtaattgccgacaccaatcgacccgtcgtcctgcgg
gccaaacacattctcattgggaacaagggagagcttcacatcgggagcccagactgccca
tataaaggcagccttaccatatccctcttcgggaggtccgacgacactgacatcgggcac
agctactttgggcgaaagtatgtaggcgttggcacagggggtacgttggaggtccacggc
gctaagaagctgtcgtggacgtttctgaacaagacgctgcaccccggcgaggccaatgag
aacagctaccactttgaaaagggctggggaaacagaggtatcatcgtccacgtcatcgac
ccaagcactggccaggtgctgcacaatgacaggtttgacacgtaccggagcaaagacgag
agccgccgcctggctcagcacgtggccgccatggaggacggcatgatcctcgccatggtg
gtcaacgacgagggctccaacaacctggaggacacggccaagaaggcactcaccagacta
gggagtcgggagctcactcggctgggattccgccatccctggagttttatcacagtgaaa
ggagattcatcctcagcgctggaggaccgtgccatctatcaaggcaccaaggcttcctca
gaggccaagagctcgcgcatcttccagacgggttacggggagcactttgcggtgaccacc
agcagccagtgggtgcaagaggcggactggactgactggttcgaccgtgatgatgaaagg
ggctctggagactgggagaaactctctgatctccataaggctttccctgagcgactgtgc
agcaacccactggacatggaggctgagacccatgacggcattccggccaacatgacaggc
gagatcttctccaagaatgacaagatctacggcttcgtctgcctcaacaaggaccagccg
gacggcctctgccataactacagagtgcgctttctatgcgggaagctggttcgcccacaa
gcgtccatcaccgtcgacatgctgtccaactcaagcatcctggagctggctgacgaggcc
cgtggctggagggcgggtgaccgcgtggtggtggccagcactgactactccatgcttcag
gcggaggagttcgacctgctgccctgcccagcctgcgccctcaaccaggtcaaagtgcaa
ggcaagccgaccttcgtgcacatgggcgaggaggtggacggggtcgacatgcgggcggag
gtgggcctgctgacccggaacgtcctgatccggggcgagatggagcctgcctgctacggc
aacgaggcttgcaagttcttcgacttcgacaccttcggcggccatctcaaggtacggaca
gggctttcggcggtgcatgtggagggtgtggagnagaagcacatgggccagcagtcgatg
gggcactacccantgcacttccacatgaatggagacgtggatgagaagggaggctacaac
nnccccacatacgtgcgcgacctgtccatccacnnacacttctcccgcgtgtcactgtgg
catggatccaatggcctggtgaaggacatagtgggctacgaggcgctgggccactgcttc
ttcacggaggatgggccggaggagaggaacacctttgaccactgcctggggctgctggtc
agagccggcacgctgctgccctccgaccgggacagtaagatgtgccgtcacatcaccaac
ggagccttcccgggatatgtggccaaaccacggcaggactgcagtgccacgtccaccttc
tggatggccaaccccaataacaacctcatcaactgtgcagctgcaggctcggaggagacg
ggattctggttcatcttccatcacgtccccacggggccctctgagggcatgtactctcca
ggcaggacggagcacacccctatgggacagttcatcaacaaccgggcccactctaactac
agggcaggaatgatccttgacaatggagtgaaaactacggaagccaacgccaaggacaaa
aggccctttctctccctggtgggcgcccgatatggtccacatcaggatgccgaccccttc
aagccccgagtccctgcgctgatccaccactttgtggcgtacaagaacgaagaccacggg
gcgtggctgcgaggaggagacgtgtggctggacgactgccagtttgctgataacggcatc
ggcctaacccttgccagtggaggcacctttccagacgacgacgggtctcgtcagcaggtg
aagaactcgctgtttgtgggcgagagtgccaaccgaggcatgcccacccctatgaacagc
atctggggccctggaggggcagacctgagcgagaggtccctacccagaggagtgaacttc
cccattcgaggcatgcaaatatatgacgggcccatcaacgtccagaattgcaccttccgc
aagtacatggctcttgacgggcgtcacaccagcgcgttcggcttccgacttaacaactcc
tggcagagctgccccaacaacaacgtcacagacatcacattcgatgacgttccgatcacg
tcccgagtgttcttcggcgagccgggtccttggtttaaccagatgcagatggacggcgac
aagaccaccatattccatgacgtggacggctccgtcagcgagtacccgggggcgttcctg
gtcaaggaggacaactggctgctgcgccacccagactgcattgatgtgcccgactggagg
gctgccatctgcagcgggcactatgcccagatatacgtccagacacgcaacccggccaac
ctggacatgaccatggtgaagaacgagtatcccgagcggccgctgaagctggtgggcgca
ctggggaagaggaaccactaccagcagttccagccagtggtgaccctggccaagggctac
accatgcactgggaccaggccgccccagctgaggtcaccatctggctcatcaacttcaac
aggggggactggatcaacgttggcatctgctacccgagaggaacagcgttcgtcgtcatc
tcagacatccacaatcgcctcactaaagagacacgcaagactggggttttcatgcgaacc
atggaccgggagaaaatgggccacacacaccagtccaggggatattactactgggaagag
gacactgggctgctgttcttgaaagctcgagcacacaatgagaaggacgactacgccttc
tgctcggtgaagggctgtgagagggtgaagatcaaagccatcatccccaaggggagcggc
cccagcgactgcatggcggaggcctaccctcgacacactgaaatgcccattgtcaacgtg
cccatgcccaagaagctagctcgcttcaacgtggtgagatttctccttccttcctctctc
tcttcgtgtatgacaacatcctgttccacccgtcagcaagtgtcagcaagtcactatgaa
tttgaactacttcaattttcaattcctttttttttttcatttacacaacgtccattacaa
ttgacattgtcttaa
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