Corynebacterium heidelbergense: CHEID_06330
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Entry
CHEID_06330 CDS
T08908
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
chei
Corynebacterium heidelbergense
Brite
KEGG Orthology (KO) [BR:
chei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chei03009
]
CHEID_06330 (rsmD)
Enzymes [BR:
chei01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
CHEID_06330 (rsmD)
Ribosome biogenesis [BR:
chei03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CHEID_06330 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_25
Methyltransf_31
PrmA
Met_10
RsmJ
TRM
UPF0020
MethyltransfD12
Methyltransf_24
N6_N4_Mtase
Methyltransf_16
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
WCZ36803
LinkDB
All DBs
Position
complement(1407821..1408384)
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AA seq
187 aa
AA seq
DB search
MSRIISGQARGRKIKVPPQGTRPTSDRAKEGLFSSLQVRFGFDGEVVLDLFAGSGALGLE
AASRGAEEVTLVDNNHAAVEVIKANAAVVEHPRVHVVEAKASSFLATAPRRHYSMVLADP
PYELADEAVGEMVRALIPALRPDAVVVVERHRDSAETDWPSGFEPTGQKLKKRTHGIARF
DMAIWRG
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcattatttctggtcaggcccggggccgcaagatcaaagttccgccgcagggc
acccgtcccacctcggatcgggccaaggagggactgttttcctccctgcaggtgcgcttc
ggcttcgacggggaagtggtgttggatctcttcgcgggttccggggctctgggtttggag
gcggcctcccggggggcggaggaggtcaccctcgtggacaacaaccacgctgcggtggag
gtgatcaaggccaacgcggcggtggttgagcaccccagggtgcacgtcgtggaagcgaag
gcctcgagcttcctggccacggcgccgcggcggcactacagcatggtgctggcggaccca
ccgtacgagttggcggatgaggcggtgggggagatggtgcgggccctcatccccgctctg
cgcccggacgcggtcgtggtggtggaacggcaccgggatagcgcggagacggactggccc
agcggcttcgagccgacagggcagaagctgaagaagcggacccacggcatcgcccgcttc
gacatggccatttggcggggttga
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