Candidatus Cardinium hertigii: DK880_00405
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Entry
DK880_00405 CDS
T05479
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cher
Candidatus Cardinium hertigii
Pathway
cher03030
DNA replication
cher03410
Base excision repair
cher03420
Nucleotide excision repair
cher03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cher00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DK880_00405 (polA)
03410 Base excision repair
DK880_00405 (polA)
03420 Nucleotide excision repair
DK880_00405 (polA)
03440 Homologous recombination
DK880_00405 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cher03032
]
DK880_00405 (polA)
03400 DNA repair and recombination proteins [BR:
cher03400
]
DK880_00405 (polA)
Enzymes [BR:
cher01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DK880_00405 (polA)
DNA replication proteins [BR:
cher03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DK880_00405 (polA)
DNA repair and recombination proteins [BR:
cher03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DK880_00405 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DK880_00405 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AWN81733
UniProt:
A0A2Z3L7X4
LinkDB
All DBs
Position
524504..527188
Genome browser
AA seq
894 aa
AA seq
DB search
MNLFSTPKLFLLDGLSLIYRAYFALAKAAMVTAAGIPTGAIVGFVNTLLEMIQKEKPTHI
IVTFDSKEKTFRHRWFPAYKAHRQAQPEAISIAIPYIQQLLTAWGILWMEYNGYEADDLM
GSLAKQAAALDCSTYLMSMDKDLAQLVGKNVSLYKPTQHGQKAVILGEKEVLAQWGISKP
TQVCDILALEGDPTDAIPGIPSIGRITAQKLIARFETLENLLENTNQLTDKLKTTLEQYA
DQGKLSKQLATICTDIPVTLDLNSCTYQLPSQTALEPLLTQLELKQFSKRLLGTAWQAGG
NASLEAGNNAPPHHYQTIETLSDCQTLVQTLQQANVWAFDIATHASSDPYTAPLLGIAFS
YKPGEAYYVPLPTDANDRKPFIQLLQPLLGQTQLLKISHDIKYKLIVLHQHGLALATPFF
DTLIAHALLAADGKKQLADLLTRYLHYTPNQPSKASSPAVSAATSGTNAAYLLQLHEKLA
LALAAEADLFYQVEMPLIPILAAMELAGVAIDVPFLHSLSTQLQDKLKKLQAEIYALAGC
SFNIDSPKQLGNVLFEQLALPTNPLKTKKGHYATGEKILEKLTAPIASAIRSYRSLQKLR
STYVEVLPTLLHPLDQRLHTSYQQATVVTGRLSATNPNLQNIPIKTKQGRELRRAFIPHN
KGDLLFSADYSQIELRIMAACSQDATMLQAFQQDQDIHQITASKLFKVATTAVDNSMRRK
AKTANFGILYGISAFGLAQRMDAISPKEAAQWMETYFAEFPGIKSYIDQTIASAEEKGYV
TTLLGRKRFFPDIHSRNAILRNTAKRSVINTVIQGSAAEMIKLAMINIYHWLQSHALRTQ
MIMQVHDELVFNVPLEEVPSLQQQIPSLMAEALPLAHVPIKVNCHLGPNWLETS
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaatctattttccacaccaaaactttttttactagatgggttatcgcttatttatagg
gcctattttgcccttgctaaggctgctatggtaacagcagcaggcatcccaacaggcgcc
atagttggttttgttaatacattgctagagatgattcaaaaggaaaaaccaacccatata
atagtaacttttgattccaaagaaaaaacttttcgacaccgctggtttcctgcttacaaa
gcccatcgccaggctcaaccagaagctatatccatagccattccttacattcaacagctc
ttaactgcatggggtatcctatggatggaatacaatggttatgaggcggatgatctaatg
ggtagcctagcgaaacaagcagctgccttggattgttctacctatttgatgtctatggat
aaagacctagcccagctcgtagggaaaaatgtctccctgtacaaacctacacaacatggt
caaaaagcggtaatattaggggagaaagaagttttagcccaatggggtatcagcaagcct
acccaagtatgtgacatcttagcactggaaggggatcctacagatgctatcccgggaatc
ccttctattggaagaataacggctcaaaaactcatagcaagattcgaaacgttagaaaat
ttattagaaaatacaaaccaactcacagataaattaaaaaccaccctggaacaatatgcc
gatcaaggtaaactatccaagcaattggctaccatttgtacagatataccagttacttta
gatctcaacagctgtacgtaccaactacccagccaaactgcattagagccacttttaacg
caactggaattgaaacaattcagcaaaaggttattggggactgcttggcaagcgggaggc
aatgcttctttagaagcgggaaataatgcgcctcctcaccactaccaaacgatcgaaacc
ctatccgactgtcaaaccctagtacaaacgctgcagcaagccaacgtatgggcatttgac
atagctacccacgcatcctcagatccctatacagctcccctattaggcattgccttttcc
tataaaccgggtgaagcttactatgtgccgctccctacggatgcaaacgatcgaaaacct
tttatacaactgcttcaaccactactaggccaaacgcaactgcttaaaataagccatgac
attaaatataaactgatcgttttgcatcagcatgggcttgctttggcaactcctttcttt
gatactcttattgcccatgctttgctggcagcagatgggaaaaagcagctagctgaccta
ctaacaagatatttacattatacgcctaatcagccttccaaagcatcttctcctgcggtg
tctgctgctactagtggcacaaacgccgcctacctcttacagctgcatgaaaagcttgcc
cttgccctagcagcagaagctgacctattctatcaggtggaaatgccgttgatacccata
ttggcagctatggagctagcaggcgttgccattgatgtccccttcttacatagcttaagc
acacaattgcaagataagttgaaaaagttacaagcagagatctatgccttagcaggctgc
tcttttaatattgattctcctaagcagctgggtaacgtattatttgagcaattagccctt
cctaccaatccacttaaaaccaagaaaggccactacgccacaggagaaaaaatattagaa
aaacttaccgcacccattgcatcagctattcggtcctaccgctccctacaaaaactccgc
tctacctacgtagaagtattgcctactctcttgcatcccctagatcaacggctgcatacc
tcctaccaacaagctactgttgttacagggagactaagcgctactaaccctaacctgcaa
aatatacctattaaaactaaacagggaagggaattaaggagggcttttatacctcataat
aaaggagatttattattttctgctgactactcccaaatagaattgcgcattatggctgct
tgttcccaagatgcaacgatgctacaagcttttcaacaggatcaagacatccatcaaatt
acagctagtaagctctttaaagtagctaccacagcagtggataacagcatgcgcagaaaa
gctaaaacggctaactttggcatcctctatggtatttctgcttttggtctggcccaacgc
atggatgctatatcccctaaagaagctgcccaatggatggaaacttactttgctgagttt
ccaggtattaaatcctatatagaccaaacgattgcctccgcagaagaaaaaggctacgta
actaccttattgggaaggaaacgtttttttccggatattcactcccgcaatgctattttg
cgcaacactgccaagcgcagtgtcatcaatacagtgattcagggtagtgctgcagaaatg
attaaattggctatgattaacatctaccattggctacaaagccatgctctccgcacacaa
atgattatgcaggtacatgatgagttggtttttaatgtgcccctagaggaagtgccttcc
ttacagcagcagataccttcccttatggcggaggcattgccattggcccatgtgcctatt
aaggtaaattgccacctgggtcctaattggttggagacaagctag
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