KEGG   Colletotrichum higginsianum: CH63R_00031
Entry
CH63R_00031       CDS       T08176                                 
Name
(RefSeq) DNA directed RNA polymerase
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
chig  Colletotrichum higginsianum
Pathway
chig03020  RNA polymerase
chig03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CH63R_00031
  09124 Replication and repair
   03420 Nucleotide excision repair
    CH63R_00031
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chig03021]
    CH63R_00031
   03400 DNA repair and recombination proteins [BR:chig03400]
    CH63R_00031
Transcription machinery [BR:chig03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CH63R_00031
  RNA polymerase III system
   RNA polymerase III
     CH63R_00031
  RNA polymerase I system
   RNA polymerase I
     CH63R_00031
DNA repair and recombination proteins [BR:chig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CH63R_00031
SSDB
Motif
Pfam: DNA_RNApol_7kD GATA Zn-ribbon_8 DUF5816 HypA FYDLN_acid TF_Zn_Ribbon
Other DBs
NCBI-GeneID: 28859113
NCBI-ProteinID: XP_018163368
UniProt: H1UYJ2
LinkDB
Position
1:115616..115914
AA seq 75 aa
MSREAYQVPTAGATSAPSAAAYTSYGAEGPQMQYLCGDCGLKFQLRRADPIRCKECGCRI
LYKERTKRMVQFEAR
NT seq 228 nt   +upstreamnt  +downstreamnt
atgtctcgcgaagcctaccaagtccccaccgccggcgcgacctccgcccctagtgcggct
gcctacacctcctacggcgccgagggcccccagatgcagtacctctgcggcgactgcggt
ctcaagttccagctgcgtcgcgccgaccccatccgctgcaaggagtgcggttgccgtatc
ttgtacaaggagcgtaccaagagaatggtccagtttgaggcgagatga

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