Colletotrichum higginsianum: CH63R_00419
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Entry
CH63R_00419 CDS
T08176
Name
(RefSeq) RNA polymerase Rpb3/RpoA insert domain-containing protein
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
chig
Colletotrichum higginsianum
Pathway
chig03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CH63R_00419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_00419
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CH63R_00419
RNA polymerase I system
RNA polymerase I
CH63R_00419
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Phage_1_1
Motif
Other DBs
NCBI-GeneID:
28859501
NCBI-ProteinID:
XP_018163756
UniProt:
H1VTT5
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Position
1:1340400..1341581
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AA seq
372 aa
AA seq
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MAPSSTPSQAELDRRRIVGVNKETVTDVSSTDYPGTYAGEDHSWDLDRFASNFRVQFHHN
AQHEASFSLVGVDASIANAFRRILIAEIPTIAIENVYIENNTSVIQDEVLAHRLGLIPFT
GNPEGIHKFLKWYRKPEQGGKGSFDYNTVQLRLRIECTRNSDAAPGETDPDKAFHNASVY
AKDIEFVPTGRQLEFFSGEDAIRPVNPDILVAKLRPGQCIELDMHMHKGIGADHAKFSPV
ATASYRLMPTITITRPILGQDAEKFAKCFPQGVIGIEKVTKKEAAVAGSGFEGQEGEKKA
VVKDAMKDTVSRECLRHPEFEGKVKLGRVRDHFIFSIESTGQWDSDELFLESVKQFKTRC
MRLEQQVINMVR
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgccctcttcaacacccagtcaagccgagctcgatcggcggaggatagtcggcgtc
aacaaggaaaccgtcaccgatgtaagctcgaccgattacccgggcacctacgctggcgag
gaccactcgtgggatctcgaccgcttcgcctccaacttccgcgtccagtttcaccacaac
gcccaacatgaggcttccttctccctcgttggtgtcgacgcctccatcgccaacgccttc
cgccgcatcctcatcgcagagatccctaccatcgccatagagaatgtctacatagagaac
aacacctccgtcatccaggacgaggtcctcgcccaccgtctcggcctcatccccttcacc
ggcaaccccgaaggcatccacaagttcctcaagtggtaccgcaagcccgagcaaggagga
aagggctccttcgactacaacactgtccagctacgcctgcgcatcgagtgcactcgcaat
tcagacgccgcccccggcgagaccgacccggacaaggccttccataacgcgagcgtctac
gcaaaagacattgaattcgtgcccacgggccgccagctcgagtttttttcgggcgaggac
gccatccgccctgtcaacccggacatcctcgtcgccaagctgcggcccggtcagtgcatc
gagctcgacatgcacatgcacaagggcatcggcgccgaccacgcaaagttctcccccgtt
gccaccgcctcgtaccgactcatgcccaccatcaccatcacgcgtccgattctgggtcag
gacgccgagaagtttgccaagtgcttcccccagggtgttatcggcatcgaaaaggttacg
aaaaaggaggctgctgtcgctggtagcggattcgagggccaagagggcgagaagaaggcc
gttgtcaaggacgccatgaaggatacagtcagccgcgagtgcttgcgccaccccgagttc
gagggcaaggtcaagctaggccgggtacgggatcacttcatcttctccatcgagagcacc
ggacagtgggacagcgatgaattgtttttggagtcggttaagcagttcaagacgaggtgc
atgcgtcttgagcagcaggtcatcaacatggttagatga
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