Colletotrichum higginsianum: CH63R_13535
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Entry
CH63R_13535 CDS
T08176
Name
(RefSeq) glycosyl hydrolase family 28
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig00040
Pentose and glucuronate interconversions
chig01100
Metabolic pathways
Module
chig_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CH63R_13535
Enzymes [BR:
chig01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
CH63R_13535
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GFIT
Motif
Pfam:
Glyco_hydro_28
SDH_alpha
Motif
Other DBs
NCBI-GeneID:
28872616
NCBI-ProteinID:
XP_018150827
UniProt:
A0A1B7XRC3
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Position
10:complement(286865..288518)
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AA seq
467 aa
AA seq
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MRVVSSLLAGLVAAAAGALAFSPEIPAGVPRNVQEFRDKHPFEKRAPDCHRKTFTLRASE
DDLDDVSDEFLEGLKKANGGGTLYLPANQTFIIGKPLDLTWLNDVHVHWEGEIKFTNDTP
YWQANAFRHPFQNSIMFWKWGGKDVKLYGEGVLNGNGQRWWNEFAGLEILDPTNAYLRPI
LFYAENATGLAIEGIHFKDSPCWTTFIVTSKDISFTDVIVTAETNNHTAEPKNTDFFDSL
NVEDVRVKRAWVNIGDDCFSPKSNATNIHVDTMYCNGTHGQSIGSLGQYAGEKSFVQDVV
IENVWMLNGQHGARLKTWAGPNIGYGFIDNVTFRNFWQANNEYTAFIDSCYFNINASTCA
AYPSRMNISNILFENFSGYTSGKYGRAVAKLTCSTNPSAVCDNIQFRNFNITTPCGGEPV
ILCDGVKGGIGMPCIPSNSTEAKAALAAKCTAPLAVATPWKVRPFDE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcgtctcgtccctcctcgctggcctggtggccgccgccgccggcgccctcgcc
ttctcgcccgagatcccggccggcgtgccgcgcaacgtccaggagttccgcgacaagcac
ccctttgagaagcgcgccccggactgccaccgcaagacctttacgctccgcgcctccgag
gacgacctcgacgacgtctcggacgagttcctcgagggcctcaagaaggccaacggcggc
ggcaccctctacctcccggccaaccagaccttcatcatcggcaagccgctcgacctgacg
tggctcaacgacgtccacgtccactgggagggcgagatcaagttcaccaacgacaccccc
tactggcaggccaacgccttccgccaccccttccagaactccatcatgttctggaagtgg
ggtggcaaggacgtcaagctgtacggcgagggcgtcctcaacggcaacggccagcgctgg
tggaacgagtttgccggtctcgagatcctggacccgacgaacgcctacctccgccccatc
ctgttctatgcggagaacgcaaccggcctggccatcgagggcattcactttaaggattcg
ccatgctggaccacctttatcgtcacttccaaggacatctccttcaccgatgtcatcgtc
acggccgagaccaacaaccacacggccgagcccaagaacaccgacttcttcgactcgctc
aacgtcgaggacgtccgcgtcaagcgcgcgtgggtcaacatcggcgacgactgcttctcg
cccaagtccaacgcgaccaacatccacgtcgacaccatgtactgcaacggcacccacggg
cagtccatcgggtccctcggccagtacgccggcgagaagagcttcgtgcaggacgtcgtc
atcgagaacgtctggatgctcaacggccagcacggcgcccgcctcaagacctgggccggc
cccaacatcggctacggcttcatcgacaacgtcaccttccgcaacttctggcaggccaac
aacgagtacacggccttcatcgactcgtgctacttcaacatcaacgcctccacctgcgcc
gcctacccctcgcgcatgaacatcagcaacatcctctttgagaacttctccggctacacg
agcggcaagtacggccgcgccgtcgccaagctgacgtgctcgaccaacccgagcgccgtc
tgcgacaacatccagttccgcaacttcaacatcaccaccccctgcggcggcgagcccgtc
atcctctgcgacggcgtcaagggcggcatcggcatgccctgcatcccctccaacagcacc
gaggccaaggccgcgctggcggccaagtgcacggcgccgttggccgtggccacaccttgg
aaggtcaggccgtttgatgagtag
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