Chitinophaga sp. XS-30: FW415_18675
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Entry
FW415_18675 CDS
T06207
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
chit
Chitinophaga sp. XS-30
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chit03009
]
FW415_18675 (rimO)
Enzymes [BR:
chit01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FW415_18675 (rimO)
Ribosome biogenesis [BR:
chit03009
]
Prokaryotic type
ribosomal protein modification factors
FW415_18675 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QEH42785
UniProt:
A0A5B9WSB4
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All DBs
Position
complement(4621237..4622544)
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AA seq
435 aa
AA seq
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MKTRTLKKDKVNIITLGCSKNMVDSEVLSGQLKANDIDVVHENTRRDHNIVVVNTCGFID
KAKEESINTILEQVELKERGRLDKVFVTGCLSERYRGDLESEIPGVDAWFGTMELPLILK
RFDADYKTELVGERLLSTPSHYAYLKISEGCNRTCAFCAIPLMRGQHVSKPIEAVVAEAE
KLVKSGVKEIMLIAQELTYYGLDLYKQRRLPELLHALADVKGLEWIRLHYAYPTKFPLEI
LDVMRERDNICNYLDMPLQHIADPMLKAMKRQITRKEIFDLVTTIREKVPGICLRTTLIA
GFPGESLEDVEDVKRFLEEVRFDRVGVFTYSHEENTGAYALEDDVPAEEKERRAQDIMET
QQEISLEKNQEKIGKVFKVIVDKKESGRYLGRTEFDSVEVDNEVIINTDRKLKPGDFVQV
KITRAFDYDLEGVLV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacaagaactttaaagaaagacaaggtaaatatcatcacgctgggctgttccaag
aacatggttgactccgaggtattaagcggacagctcaaagccaatgacatcgatgtagta
catgagaatacccggcgcgatcataacatcgtggtcgtaaatacctgtggatttatcgac
aaggcaaaagaagaatccatcaatacgatccttgagcaggtggaattgaaggaaaggggc
cggctggataaagtgttcgttacgggctgcctgagcgaacgttaccgcggggacctggaa
tcggagatacccggtgtggacgcctggtttggtaccatggagcttccccttatcctgaaa
cgttttgatgcggattacaagaccgaattggtcggggagcgtttgctcagtacaccctcg
cactatgcatacctgaaaatatcggaaggctgcaaccgcacctgcgcattctgcgcaatc
ccgctgatgcgcggccagcacgtatccaaacccatcgaagcggtggtggcggaagcggaa
aagctggtgaaaagcggggtaaaggagatcatgctcattgcgcaggaactgacctattat
ggcctggacctgtacaagcagcgccgtctgcctgaattgctgcatgcgttggcggatgtg
aaagggctggaatggatcaggctgcactatgcctatcccactaaattcccgctggaaata
ctggacgtgatgcgggaaagggataatatctgcaactacctggatatgcccctgcaacat
attgcggacccgatgctcaaggccatgaaacggcagatcacccgcaaggagatcttcgac
ctggtgaccaccatccgcgaaaaagtgccgggcatttgtctgcgtactacgctgatagcg
ggttttccgggagaaagcctggaagatgtggaagatgtgaaacgcttcctggaagaagtg
cggttcgacagggtgggcgtgttcacctacagccatgaggagaacaccggcgcttatgcg
ctggaagacgatgtccccgctgaggaaaaagaacggcgcgcacaggatatcatggaaaca
cagcaggaaatttccctggaaaagaaccaggaaaaaataggtaaagtatttaaagtaatc
gttgataaaaaagaatccggccgttacctgggccgtacggagttcgattcggtggaggtg
gataatgaggtgatcattaacacagacaggaagttgaaacccggcgattttgtacaggtt
aaaattaccagggcgttcgactatgacctggaaggagtgctggtttga
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