Chryseolinea soli: D4L85_09690
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Entry
D4L85_09690 CDS
T05641
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
chk
Chryseolinea soli
Brite
KEGG Orthology (KO) [BR:
chk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chk03009
]
D4L85_09690 (rimO)
Enzymes [BR:
chk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D4L85_09690 (rimO)
Ribosome biogenesis [BR:
chk03009
]
Prokaryotic type
ribosomal protein modification factors
D4L85_09690 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
DUF3420
Motif
Other DBs
NCBI-ProteinID:
AYB30831
UniProt:
A0A385SKF0
LinkDB
All DBs
Position
2227860..2229191
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AA seq
443 aa
AA seq
DB search
MKTKGTKNTKVNIVTLGCSKNLVDSEVLLTQLRGNGIDAVHESKTDDASVVVINTCGFID
NAKQESIDTILRYVDAKEEGIVDKVYVTGCLSQRYKDDLEKEIPEVDAWFGTRDLSRMLK
VFKANYKHELVGERILTNPSHYAYLKISEGCDRPCSFCAIPIMRGGHISRPMEELVLEAR
NLAKNGTKELLLIAQDSTYYGLDLYKKRNLADLLRNLSDVEGIDWIRLHYAFPTGFPMDA
LEVMAERSNICKYIDIPLQHASTRMLQVMRRGTTRDKTEALLQTIREKVPGIAIRTTMIA
GHPTESQQDFEEMMDFVEKSRFDRLGIFSYSHEENTHSYSLPDDVPAEVKQQRLEDVMAL
QEGISLELNSQKIGKTFKVLVDRKEGGNFIGRTEHDSPEVDNEVIIESPGDYLRLGDFVN
VFITGATEFDLTGSAVQGAAVKS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacgaagggaaccaagaacaccaaagtcaacatcgtcaccctgggctgctccaag
aacctggtagactccgaagtactgctcacccaattgcggggcaacggcatcgacgccgtg
cacgagtccaaaaccgacgacgccagcgtggtggtgatcaacacctgcggtttcatcgat
aacgccaaacaagagtccatcgacaccattctgcgctatgtagacgccaaggaagaaggg
attgtggacaaggtctacgtgaccggctgcctttcgcagcgctacaaagacgacctcgaa
aaagaaatccccgaagtggacgcctggtttggcacccgcgacctgtcgcgcatgctcaag
gtgttcaaggccaattacaagcacgaactggtaggcgagcgcatactgaccaacccaagc
cattatgcctacctgaagatctccgaaggctgcgaccgcccctgttcattctgcgccata
cccatcatgcgcggcggccacatttcgcggcccatggaagagctggtgctggaagcccgg
aacctggccaagaacggcacaaaagaattgttgctcatcgcccaggactccacctactat
gggcttgatctgtataagaaaagaaatctcgccgatctgctccggaatctttcggatgtg
gaaggcatcgactggatccgcttgcactatgccttccccaccggtttccccatggacgcc
ctggaagtgatggccgagcgcagcaacatctgcaaatacatcgacatccccctgcaacat
gcatccacccggatgctgcaagtgatgcggcgcgggaccacgcgcgataagacggaagcc
ttgttgcaaaccatccgcgagaaagtgccgggcattgccatccgcacgaccatgatcgcc
ggccatcccacggagagccagcaagactttgaggagatgatggactttgttgagaagtcc
cgcttcgaccgcctcggcatattctcctattcacacgaagaaaacacacacagctatagc
ctgcccgacgatgtgccggcagaggtgaaacaacaacgcctcgaagacgtgatggcacta
caagagggcatttcgctggagctgaactcgcaaaagatcggcaagaccttcaaggtattg
gtcgaccgcaaagaaggcggcaacttcatcggccgcaccgagcacgactcgcccgaggta
gacaacgaagtgatcatcgaaagtcccggtgactacctccggttgggagattttgttaac
gtattcataacgggtgctaccgagtttgatttaaccggtagcgcggttcaaggagcggct
gtaaaatcttaa
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