KEGG   Corynebacterium humireducens: B842_06015
Entry
B842_06015        CDS       T03576                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
chm  Corynebacterium humireducens
Pathway
chm03030  DNA replication
chm03410  Base excision repair
chm03420  Nucleotide excision repair
chm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B842_06015
   03410 Base excision repair
    B842_06015
   03420 Nucleotide excision repair
    B842_06015
   03440 Homologous recombination
    B842_06015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chm03032]
    B842_06015
   03400 DNA repair and recombination proteins [BR:chm03400]
    B842_06015
Enzymes [BR:chm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B842_06015
DNA replication proteins [BR:chm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     B842_06015
DNA repair and recombination proteins [BR:chm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     B842_06015
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B842_06015
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_lambd_f HHH_5 HHH_2
Other DBs
NCBI-ProteinID: AJE33052
UniProt: A0A0B5D7C6
LinkDB
Position
1216001..1218646
AA seq 881 aa
MTENNRLLLIDGHSMAFRAFYALPAENFSTTGGQHTNAVYGFLSMLANILAEEQPGHVAV
AFDVGRKTFRTEMFPEYKAQREASPPEFKGQVDILQEVLETLGIQTLSMENYEADDILAT
LATAAEPLGYETLIITGDRDYLQLVNENVTVLYPMRGVSNLHRFTPEAVEEKYGLTPQQY
PDFAALRGDPSDNLPNIPGVGEKTATKWIQQYGTLENLLDHADEIRGKAGDNLRERLDQV
RLNRKLTHMLTDMELPVGPDQLTLRPADVAAVAARFDDLQFGANLRERVLAAVPTEGTVE
ETTRELVDVTVDTAPLAEWLPARAGQGLAMYVVGDGSPNQGDVSAVAIIDTERHAVSAEM
ADLSPADEKALATWLASEDPKYLHESKAAFHMFAGRGMALEGVVHDTAIAAYLLRPGQRT
YELKDIYQRHLQRQLTEPEDQLSLLGDTSLVDSAAAVLELAEELTGQLQDISAYELYRDL
EIPLARILARMEATGIAVDVETLEEQLATFIDQVKEEEAAARELAGDPDLNLSSPKQLQV
VLFETFGMPKTKKTKTGYSTAASEIEGLAAKNPHPFLDHLLAHREFQKMKTTLEGLIKTV
QPDGRIHTTFNQTVASTGRLSSTEPNLQNIPVRTPAGRKIRSAFVVGEGYECLLTADYSQ
IEMRVMAHLSQDPGLIDAYQQGEDLHNYVGSRVFEVPIDQVTPELRRRVKAMSYGLVYGL
SAFGLGQQLSIPAGEAKGIMDSYFERFGGVKRYLAEVVEQARKDGYTSTLFGRRRYLPEL
NSDNRVARENAERAALNAPIQGTAADIIKVAMIRVDRAFAEAGVTSRVLLQVHDELVVEV
APGELDEVRAILEREMDSAITLRVPLEVSAGAGANWDEAAH
NT seq 2646 nt   +upstreamnt  +downstreamnt
gtgactgagaacaaccgcctgctgctcatcgacggccactccatggcgttccgtgccttc
tacgccctgcccgccgagaacttctcgacgacgggtggccagcacaccaacgccgtgtac
ggcttcctctccatgctggcgaacattctcgccgaggaacagccgggacacgtcgcggtc
gccttcgacgtgggccgcaagaccttccgcaccgagatgttccccgagtacaaggcccag
cgcgaggcctccccgccggagttcaaggggcaggtggacatcctccaggaggtgctggag
accctcggcatccagaccctgagcatggagaactacgaggccgacgacatcctcgcgacc
ctcgccaccgcggcggagcccctcggctacgagacgctcatcatcacgggcgaccgcgac
tacctccagctggtcaacgagaacgtcaccgtgctctacccgatgcggggcgtgtccaac
ctgcaccgcttcacgccggaggccgtcgaggagaagtacggtctcaccccgcagcagtac
ccggacttcgcggccctgcgcggcgacccgtccgacaacctgcccaacatcccgggcgtc
ggcgagaagaccgccaccaagtggatccagcagtacggcaccctcgagaacctcctggac
catgccgacgagatccgcggcaaggccggcgacaacctccgcgagcggctcgaccaggtc
cggctgaaccgcaagctcacccacatgctcaccgacatggagctgcccgtcggccccgac
cagctgacgctgcgcccggcggacgtcgccgcggtcgccgcgcgtttcgacgacctccag
ttcggcgccaacctccgggagcgcgtgctggcagccgtccccaccgagggcaccgtcgag
gagaccacccgggagcttgtcgacgtcaccgtggacaccgcgcccctcgcggagtggctg
cccgcccgcgcggggcaggggctggcgatgtacgtcgtcggcgacggttccccgaaccag
ggtgacgtgtcggcggtggcgatcatcgacacggagcgacacgccgtgagcgcggagatg
gcggacctctccccggcggacgagaaggccctggccacgtggctggcgtcggaggacccg
aagtacctgcacgagtcgaaggccgcgttccacatgttcgccggccgcggcatggcgctg
gagggcgtggtccacgacaccgcgatcgccgcctacctcctgcgtccggggcagcgcacc
tacgagctcaaggacatctaccagcggcacctgcagaggcagctcacggagccggaggac
cagctctccctgctgggggacacctccctggtcgactcggcggctgcggtgctggagctc
gccgaggaactgaccgggcagctgcaggatatctccgcctacgagctctaccgcgacctg
gagatcccgctggcgcggatcctcgcccgcatggaggcgacgggcatcgcggtggacgtc
gagacgctcgaggagcagctcgccaccttcatcgaccaggtgaaggaggaggaggccgcc
gcccgtgagctggccggcgacccggatctcaacctctcgagcccgaagcagctgcaggtc
gtcctcttcgagaccttcggcatgccgaagacgaagaagacgaagaccggctactccacg
gctgcctccgagatcgagggtctggcggcgaagaacccgcaccccttcctcgaccatctg
ctggcgcaccgcgagttccagaagatgaagaccacgctggaggggctgatcaagacggtg
cagccggacggccgcatccacaccacgttcaaccagacggtcgcctccaccggccgcctc
agctccaccgagccgaacctgcagaacatcccggtgcggaccccggcgggccggaagatc
cgctccgccttcgtcgtgggggagggctacgagtgcctgctcaccgccgactactcgcag
atcgaaatgcgcgtcatggcgcacctgtcccaggaccccgggctcatcgacgcctaccag
cagggcgaggacctgcacaactacgtcggttcccgcgtgttcgaggtgccgatcgaccag
gtcaccccggagctgcgccgccgcgtgaaggccatgtcctacggcctggtctacggtctg
tcggccttcggtctcggccagcagctgagcatccccgccggtgaggcgaagggcatcatg
gacagctacttcgagcggttcggcggcgtgaagcgctacctcgcggaggtggtcgagcag
gcccgcaaggacggctacacgtccacgctcttcgggcgtcgtcgctacctgccggagctc
aactccgacaaccgtgttgcccgggagaacgccgagcgtgcggccctcaacgcgccgatc
cagggtacggcggcggacatcatcaaggtcgcgatgattcgcgtcgaccgcgcgttcgcc
gaggccggcgtcacctcccgcgtcctcctccaggtccacgatgaactcgtggtggaggtc
gccccgggggagctggacgaggtccgcgcgatcctcgagcgcgagatggactccgctatc
acgctgcgcgtccccctggaggtctccgccggggccggggcgaactgggacgaggccgcg
cactag

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