Cryptosporidium hominis: Chro.60382
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Entry
Chro.60382 CDS
T00210
Name
(RefSeq) DNA-directed RNA polymerase II/III subunit
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cho
Cryptosporidium hominis
Pathway
cho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Chro.60382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cho03021
]
Chro.60382
Enzymes [BR:
cho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Chro.60382
Transcription machinery [BR:
cho03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
Chro.60382
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
3415667
NCBI-ProteinID:
XP_667260
LinkDB
All DBs
Position
6
AA seq
1869 aa
AA seq
DB search
MSTIRTRIKVGDKELLIPENVNLSKENVVNVFKRRNIEAVEFSAMGKDEIARSAHMEVLH
REIYRPMTNIPLQGGVLDSRLGAHRADAQCSSCGGTLKTCGGHWGYIDLQQPVFHVGYFK
HLYGVLCCICKSCGAFLLKGEEKRQHLAKLKQSYSIAHSYRLQFRKLVERCKKVKTCPRC
MSQQGQLRRTIRPTLDQFMKLTHTIKVDGKEYVEDLTPIFVQTLLERVPYQDLDILETFK
PGNLLISRLPVPPNCIRPSVTMGESGSNEDDLTVILSEITDLNNIIKSQMKSGFQTFQLL
GNWEFLQLQCTRLINADAPGVNQLLASKNIPKAGRGVCQRLKGKEGRFRGNLSGKRVDFS
GRTVISPDPNIEVDEVVVPMIIAKKLTYPERVNAINIDSLREAVLNGHDIWPGACYVYKS
NGSKSSLRYANRRVVSERLEIGDIVERHMKTGDIVLFNRQPSLHRLSIMSHKVVVMPWRT
FRFNECACAPYNADFDGDEMNLHLPQNELARSESKHLMGLMNNLVTPRNGEPLIAATQDF
LLGMYVLTGRDIFLTRDQFSQYCCHFSNGQIPMELPPPTILKPVELWTGKQVFNMILRPN
SNENERIDVSFELKERDYDSKSDLKDLCPNEGYVVVRHSELLAGAIGKKVLGGGSKEGLF
FYILLENNAKKSSECMGRISRFVSRYLANKGMTIGIDDVTPNAELLVAKKNLLEDGYQRV
QDEINSYEKGKLTPHPGLSLEDTLELKVKKILDDIRNEAGKASHISLPPSNKPLLMYLSG
AKGQLINIAQMVACVGQQNVAGQRIQNGFTNRTLPHFKMNCVDGRSRGFVGNSFFSGLQP
DEFFFHTMSGREGLVDTAVKTAETGYMQRRLVKALEDLCIKYDQTVRTSDGQIIQFIYGD
DGLNPMLMEEKLELVNFGKLFKHIYSQTKVHSNFYFLFNNYLNFLENQPLKNDLNISENP
KQSNSKRSKRKSTNTCDSNFIMEETKNDQNIHRFKLLPPSNEVVNHLILLFENYLSNGSC
ELLNNPLAPAGTNDAHACTINTVDTGDFKKELIFDEIDNLLVQIEKKYEEEERRIKKEKG
EEERRRAKKKMGEGVIRSKLKRMVDIKEEEEDKEENLGKEEQMIKQEENIGVKVEQLEEQ
KLEDFQFSYYCSQNISQIIFDPKYFENESKEIPKSVMDKLTTLKIWYTKNGLKWCRNNET
CICMRNSVLAHYLIYNYLPIMDTNVPLIPFEMLKWMEFLIRMTRELVPSSLLVHQKISIL
ESPTHQEKTHKLNIFSNNMRKFLISHIERISKYRKAQGEKEGLKLEDYMQIIEDFYNDSR
LDSEWFMKILRHDPNVYRIASLGRSKELSEFSRYIRRFYSVIIPDSDNIETELGEKEQEE
ESLGGRKRSIEIGSFTNAVNSSKRRIIDDEGEFGISSSTCSSKFKSIRYNPEYAITIRQL
YEFIKASWSKYMKAITEPGEAVGAIAAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK
EIINAATKILTPIIEAKLENDSDFNYAQIVKGSIVKTLLNEVVSDIEELYSPNGVFININ
LNEETIKGHYLDINAYTVRDSIVSHGPISKIKLKLEDIQVLDLWKLSILIGGGISQIGSS
SNNINGTGTVNASNTGMGNTMNVYFQTQLLKKGLQNVVVSGIPGIKRSVIRQDDKEDPIT
GEKRKCYSLAVEGYGLLKLMGINGIIGTTTVSNHVMEVREVLGIEAARKVIIQEVQKCMD
AYSMDIDLRHIQLLADIMTFRGDVLGISRFGIQKMRTSTLMLASFEETNEHLFEAAFQNR
VDPVFGVSECVIMGKPIKIGTGSFDILYNSPSNIQKSKLFLNGSKKDSVGRLSQFLSSIK
KQTLSRDHC
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgatcagaacaaggattaaagttggagataaggagcttttgattccagaaaat
gtgaatcttagtaaggaaaatgtagtcaatgtctttaaaaggcgaaatattgaagcagtt
gagttctctgcaatgggaaaggatgaaattgctagatctgctcatatggaagttttgcat
agagagatttatagaccaatgacaaatataccacttcaagggggggttttagattcaaga
ttaggagctcatagggctgatgctcagtgttccagttgtggaggaactttaaagacttgt
ggaggccattggggttatattgatctacaacaacctgtctttcatgttggttattttaag
catttatatggagttttgtgttgtatctgtaagagttgtggagcttttctccttaaagga
gaggagaaacgtcaacatcttgccaagctaaaacagtcatattctattgctcattcttat
agattacaatttagaaagcttgttgagagatgtaagaaagtcaaaacatgtccaagatgt
atgtctcagcaaggtcaactaaggagaacaattagaccaactttagaccagtttatgaag
ttaactcatactattaaagttgatggtaaagaatatgttgaggatttaactccaattttt
gttcaaacacttttagaaagagttccatatcaagatttggatattcttgaaacttttaaa
cctggaaatctactcatttcacgccttcctgtcccacctaattgtattagaccatcagtt
actatgggagaatctgggagtaatgaggacgacttaacagtaattctgtctgaaattact
gatttgaataatattatcaagtctcaaatgaaatcaggatttcaaacttttcagttactt
gggaattgggaatttcttcagcttcaatgcaccagactaattaatgctgatgctccagga
gttaatcaactcttagctagtaagaatatcccaaaagctggaagaggagtatgtcagagg
cttaaaggtaaagaaggacgtttcagaggaaatttgagtggtaaaagagttgattttagt
ggaaggactgttatttctcctgaccctaatattgaagttgatgaagttgtagtacctatg
atcattgcaaagaaattgacttatcccgaaagagttaatgctattaatattgactcttta
agagaagctgttctaaatggacatgatatttggccaggagcatgctatgtttataagagt
aatggaagcaaatctagtcttagatatgctaatagaagagttgtatcagagcgtcttgag
attggagatattgtagaaagacatatgaaaactggagatatcgtcttattcaatagacaa
ccaagtttacatagacttagtattatgtctcacaaagttgtagttatgccatggagaact
tttagattcaatgaatgtgcttgtgctccttataatgcagatttcgatggagatgaaatg
aatcttcatcttcctcagaatgaactagcaagatcagaatccaaacatttgatgggactt
atgaataacttagtaactccaagaaacggagaacctttgatagcagcaactcaagatttt
cttttaggaatgtatgtactaacaggaagagatatattcttaacaagagatcagttttct
caatactgttgtcacttttcaaatggacaaataccaatggagttacctcctccaacaatt
ctaaagcctgtagagctttggacaggaaaacaggtatttaatatgatattaagaccaaac
tcaaatgaaaatgagagaatagacgtttcatttgaattaaaagaaagagactatgactca
aaatcagatctcaaagatctttgtcctaatgaaggttatgtagtggtgagacattctgaa
cttttagcaggagcaataggaaagaaagtacttggaggaggatctaaggaaggactcttt
ttctatatattacttgaaaacaatgcaaaaaagagctcagaatgtatgggacgtatttct
agatttgtctcacggtatttagctaataaaggaatgacaattggaatcgatgatgttact
ccaaatgctgaacttcttgtagcaaagaagaatctattagaagatgggtatcaaagagtt
caagatgagattaattcatacgaaaaggggaaactaactcctcatcctggtctttctctt
gaagatactttagaacttaaagtaaaaaagattctagacgatattagaaatgaagcaggt
aaagcttctcatattagtctccctccttctaacaaacctcttcttatgtatctatcagga
gcaaaaggtcaactaattaatatagctcaaatggttgcctgtgtagggcaacaaaatgtt
gctggacaaagaattcaaaatggctttaccaatagaactcttcctcatttcaagatgaat
tgtgttgatggaagaagtagaggatttgtaggtaatagttttttttcaggattacaacct
gatgaattttttttccatacaatgtcagggagagagggactagttgatacagctgttaag
acagctgaaacaggatatatgcaaagaagacttgtgaaagcattagaagatctttgtatc
aaatatgatcaaacagtaagaacaagtgatggacagattattcaattcatatatggagat
gatggacttaatccaatgcttatggaagaaaagttagaacttgttaactttggaaagctt
ttcaaacatatttactcacaaactaaagtccattccaacttttacttcctatttaacaat
tatctcaactttttagaaaatcaacccttgaagaatgatttaaatatttcagaaaacccc
aaacaatcaaattccaaaagatccaaaagaaaatcaacaaatacttgtgattcaaacttc
attatggaagaaacaaaaaacgaccaaaatattcacagatttaaacttctcccaccctca
aatgaagttgttaaccaccttattttgctttttgaaaactatctatctaatggttcatgt
gaacttttaaataatcctttggcgccggcgggaacaaatgatgcacatgcatgcactata
aataccgtcgatactggtgattttaaaaaagagctaatatttgatgaaatagataattta
ttggttcagatagaaaaaaaatatgaggaagaggaaagaaggattaaaaaagagaaggga
gaggaggagagaagaagagcaaagaaaaagatgggagaaggtgtaattagatcaaagctt
aaaagaatggtagatataaaggaagaagaggaggataaagaggagaatttggggaaagag
gagcaaatgataaaacaagaggagaatattggtgttaaggtagaacaattggaggagcag
aaactagaagattttcagttttcttattattgtagtcaaaatattagccagatcatattt
gatccaaagtactttgaaaatgagtccaaggagattccgaaatcagtaatggataaattg
acgactttgaagatttggtatacaaagaatggattaaagtggtgtaggaataacgagaca
tgtatttgtatgagaaatagtgtattagctcactatttgatctacaattacttgccaatt
atggatacaaatgtacctctaattccttttgagatgttgaaatggatggaattcttgatt
aggatgacaagagagcttgttccaagctctcttttagtccatcaaaagatttcaatttta
gagtcaccaactcaccaagaaaagactcataaattgaatatattctcaaataatatgagg
aagtttttgatttcccatattgagaggatttcaaagtatagaaaagctcaaggagaaaag
gagggactcaaattagaagattacatgcaaattattgaagatttctataatgattccaga
ttagactccgagtggtttatgaaaatccttcgacatgatccaaatgtttacagaattgca
tctttaggaagatctaaggaacttagtgaattctccaggtatatccgaagattctattct
gtaattattcctgatagtgataacatagagacagaattaggagaaaaagaacaggaagaa
gagagccttggaggaaggaagagaagtatagaaataggctctttcactaatgctgtaaac
tcttcaaagaggagaattattgatgatgaaggagaatttggaatctcctcatctacttgc
tcttcaaaattcaagtctataagatataatcctgaatatgctattactattagacaattg
tatgaattcattaaagcgagttggagcaagtacatgaaagcaatcacagaaccaggtgaa
gctgttggagcaattgctgctcaatctattggagagccaggaactcaaatgactttaaaa
actttccactttgcaggagttgctagcatgaatgttactttgggagtaccaagaattaaa
gaaatcattaatgctgctacgaagattcttacccctattattgaagctaagcttgaaaat
gattcagactttaattatgcccaaatagttaaaggatctattgtaaaaacactcctaaac
gaagtagtttctgatattgaagagctttattcaccaaatggagtctttattaacataaat
cttaatgaagaaaccattaaaggccattatcttgatattaacgcatacactgtaagagat
tctatcgttagtcacggacctatctcaaagatcaaacttaaattagaagatattcaagtt
cttgatctttggaaactttcaattcttattggcggtggaatttcacaaattggatcttca
tctaataatattaacggtaccggtaccgttaatgcatcaaataccggtatgggaaataca
atgaatgtttatttccagacacaattactcaaaaaaggtttacaaaatgttgtagttagt
ggtatacctgggataaaaagaagtgtaattagacaggatgataaggaagatccaatcact
ggagagaagagaaagtgttatagtcttgcagtagaaggatatggacttttaaaattaatg
ggtatcaatggtataattggtacaacaacagtatcaaatcatgtaatggaggtaagagaa
gtacttggaattgaagcagcaagaaaagtaattattcaagaagtacagaaatgtatggat
gcttatagtatggatattgatctaaggcatatacagttactagctgacatcatgactttt
agaggagacgtcttgggtatttctagatttggtattcaaaagatgcgtacttcaacactt
atgttggcatcatttgaggagacaaatgagcatttatttgaagcagcttttcagaataga
gttgatccagtatttggtgttagtgaatgtgttataatgggtaagcctataaaaattggt
accggatcttttgatatcctttataactccccttcaaatatacaaaaaagtaaattattt
ctgaatggaagcaagaaagattcagttggaaggctttcacagtttttaagtagtataaaa
aaacagactctgtccagagaccattgttaa
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integrated database retrieval system
