Chromobacterium phragmitis IIBBL 274-1: DK843_19990
Help
Entry
DK843_19990 CDS
T05744
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chrb03009
]
DK843_19990
Enzymes [BR:
chrb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DK843_19990
Ribosome biogenesis [BR:
chrb03009
]
Prokaryotic type
ribosomal protein modification factors
DK843_19990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AXE36370
UniProt:
A0A344UM72
LinkDB
All DBs
Position
4147830..4149146
Genome browser
AA seq
438 aa
AA seq
DB search
MNKTPRVGFVSLGCPKAASDSEQILTRLRAEGYEIAPSYDGADLVVVNTCGFIDSAVEES
LDAIGEALNENGKVIVTGCLGAKGDAVRDVHPSVLAVTGPHATEEVMTAVHTHLPKPHDP
FVDLVPDIGVRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLESRPIHDVLREAESLAKA
GVKEILVISQDTSAYGVDTKYKLGFHNGRPVKTRMTELCEELGRHGIWVRLHYVYPYPHV
DEVIPLMRDGKILPYLDIPFQHASQKVLKLMKRPANSDNVLARIKKWREICPELVIRSTF
IVGFPGETEEDFEELLAFICEAELDRVGCFTYSPVEGATANELPNPVPEEVKEARKERFM
AVQAEISARRLERRVGQTLQVLVDEIDDEGTAVCRSYADAPEIDGLVFVEDAAGMQPGEF
YQVEIVDCSEHDLWGERR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacccctcgcgtagggttcgtttcgctgggctgccccaaggccgccagcgat
tccgagcagatcctgacccgccttcgcgccgaaggctatgaaatcgcgccgtcctacgac
ggggcggatttggtggtggtgaacacctgcggcttcatcgattccgctgtcgaggagtcg
ctggacgccatcggcgaagcgctgaacgaaaacggcaaagtgatcgtcaccggctgtctg
ggggccaagggcgatgcggtgcgcgatgtgcatccgtcggtcttggccgtgaccggcccg
cacgccacggaagaagtgatgacagcggtgcatacccacctgcccaagccgcatgacccc
ttcgtcgacctggtgccggacatcggcgtgcgtctgacgcccaagcactacgcttatctg
aagatttccgagggctgcaaccaccgttgcaccttctgcatcatcccgtccatgcgcggc
gatctcgaaagccgccccatccacgacgtgctgcgcgaggccgagagcctggccaaggcc
ggcgtcaaggaaatcctggtgatctcgcaggacacctcggcttacggcgtggacaccaag
tacaaactgggcttccacaacggccgcccggtgaagacccggatgaccgagctgtgcgag
gagctgggccgccacggcatctgggtgcgcctgcattacgtctacccgtacccgcatgtg
gatgaagtcattccgctgatgcgcgacggcaagatcctgccctacctggacatcccgttc
cagcacgccagccagaaggtgctgaagctgatgaagcgcccggccaatagcgacaacgtg
ctggcgcgcatcaagaagtggcgcgaaatctgcccggagctggtgatccgctccaccttc
atcgtcggcttccccggcgaaaccgaggaggacttcgaagagttgctggccttcatctgc
gaggccgagctggaccgcgtcggctgcttcacttactccccggtggaaggcgccacggcc
aacgagctgcccaatccggtgccggaagaggtgaaggaagcccgcaaggagcgcttcatg
gccgtgcaggccgaaatcagcgcgcgccggctggagcgccgcgtcggccagaccctgcaa
gtgctggtggacgagatcgacgacgaaggcacggccgtgtgccgcagttatgccgacgcg
ccggaaatcgacggcctggtgttcgtcgaggacgccgccggcatgcagccgggcgagttc
taccaagtggagatcgtcgactgcagcgagcacgacctgtggggcgaacgccgctga
DBGET
integrated database retrieval system
