Chromobacterium phragmitis IIBBL 112-1: DK842_08530
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Entry
DK842_08530 CDS
T05549
Name
(GenBank) cyclic diguanylate phosphodiesterase
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DK842_08530
Enzymes [BR:
chri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
DK842_08530
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Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
DUF6404
DUF6082
Motif
Other DBs
NCBI-ProteinID:
AXE29932
LinkDB
All DBs
Position
complement(1794461..1796002)
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AA seq
513 aa
AA seq
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MNPLQPRRRHRLSHVLFALLVAALPLAATVPTLLWQERQDLQANARQQVSQAMELVEGIL
DQADHAARVLLPLAGGPCEQAVYPLRRQVAVAPFVRSAALLIKDRVYCSALSGSTDWALP
RRDFVDGRIQLLAGNSVTPDVPLLYYRVNGKRGDAVAAVDGRYLQLALQDASDNDPVLLQ
VGGLWLGPHQVGTGQPPANWQQQVVRRSGRYPFLIRSGYDIPPWHRLLWARHALLAAVLF
LLGLLAGGTLYWLLSRPASFTGELRRALANDEFVGYLQPLVRPGMADWRGAEVLMRWDHP
REGLIRPDLFIPRAEESGLIVEMTRRMMDAVIAKVAKLSLPEDFHLGVNISPAHLREGNL
IRDCRRWLDRLAGSGAVLALELTEREMVEITPEVEALFHSLDQMGVKVALDDFGTGHSSL
VYLQQLTVDGLKIDQSFVAGIGSDGLSAHIVDSVAELAAKLGLATVAEGVETAEQYDYLS
RLGVRWLQGFYIARPMPLDEFVRRMRQGGTWQR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccctgcagccacgtcgtcgccatcgtctgtcccatgtgttgttcgccttgctg
gtggcggcgttgccgctcgccgcgaccgttcccaccctgctatggcaagagcggcaggac
ttgcaggcgaacgcgcggcagcaggtgagccaggcgatggaactggtggagggcattttg
gaccaggccgaccatgcggcgcgcgtcttgctgccgctggcgggcggcccctgcgagcag
gcggtgtacccgctgcgccgccaggtggcggtggcgccatttgtccgcagcgccgcgtta
ttgatcaaggacagggtctactgttctgccttgagcggcagcaccgactgggcgctgccg
cggcgggatttcgtggatggccgcatccagctgctggccggcaactcggtcacgcccgac
gtgccgctgctgtattaccgcgtgaacggcaagcgcggcgacgcggtggcggctgtggac
ggccgctatctgcagctggcgctgcaggacgccagcgacaacgatccggtgctgctgcag
gtgggcggcctctggttgggcccgcatcaggtgggaaccggccagcctcccgccaactgg
cagcagcaggtcgtccgccgctctggccgctatccgttcctgatccgctcaggctatgac
attccgccctggcaccgcctgctgtgggcgcgccacgcgctgctggccgcggtgctgttc
ctgctgggcctgcttgccggcggcacgctgtactggctgctgagccgtcccgcctccttc
accggcgagttgcggcgagcgttggccaatgatgaattcgtcggctatctgcagcccttg
gtgcggccgggcatggccgactggcgcggcgccgaggtgttgatgcgttgggatcatccg
cgcgaggggttgatccgtccggacctcttcattccccgcgccgaggaaagcgggctgatc
gtcgagatgacgcgacggatgatggatgcggtgatcgccaaagtggccaagctgtcgctg
cccgaggatttccatcttggcgtcaacatcagtcccgcccacctgcgcgagggcaacctg
atccgcgattgccgccgctggctggaccggctggccggcagcggcgcggtcctggcgctg
gagctgaccgagcgagagatggtggaaatcacgcccgaggtggaagcgctgttccacagc
ctggaccagatgggcgtcaaggtggcgctggacgatttcggcaccggccattccagcctg
gtctacctgcagcaattgacggtcgacggcttgaagatagaccagagcttcgtcgccggc
atcggcagcgacggcttgtccgcccacatcgtcgacagcgtggcggaactggcggccaag
ctgggcctggcgacggtggcggagggcgtggaaacggcggaacagtacgattatctgagc
cggctaggcgtgcgctggctgcagggcttctacatcgcccggccgatgccgctggacgag
ttcgtccgccgcatgcgccagggcggcacctggcagcgctga
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