Chromobacterium phragmitis IIBBL 112-1: DK842_14430
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Entry
DK842_14430 CDS
T05549
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chri03009
]
DK842_14430
Enzymes [BR:
chri01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DK842_14430
Ribosome biogenesis [BR:
chri03009
]
Prokaryotic type
ribosomal protein modification factors
DK842_14430
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AXE30976
LinkDB
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Position
3001307..3002623
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AA seq
438 aa
AA seq
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MNKTPRVGFVSLGCPKAASDSEQILTRLRAEGYEIAPSYDGADLVVVNTCGFIDSAVEES
LDAIGEALNENGKVIVTGCLGAKGDVVRDVHPSVLAVTGPHATEEVMTAVHTHLPKPHDP
FVDLVPDIGVRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLESRPIHDVLREAESLAKA
GVKEILVISQDTSAYGVDTKYKMGFHNGRPVKTRMTELCEELGRHGIWVRLHYVYPYPHV
DEVIPLMRDGKILPYLDIPFQHASQKVLKLMKRPANSDNVLARIKKWREICPALVIRSTF
IVGFPGETEEDFEELLAFIREAELDRVGCFTYSPVEGATANELPNPVPEEVKEARKERFM
AVQAEISARRLERRVGQTLQVLVDEIDDEGTAVCRSYADAPEIDGLVFVEDAAGMQPGEF
YQVEIVDCSEHDLWGERR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacccctcgcgtagggttcgtttcgctgggctgccccaaggccgccagcgat
tccgagcagatcctgacccgccttcgcgccgaaggctatgaaatcgcgccgtcctacgac
ggggcggatttggtggtggtgaacacctgcggcttcatcgattccgctgtcgaggagtcg
ctggacgccatcggcgaagcgctgaacgaaaacggcaaagtgatcgtcaccggctgtctg
ggggccaagggcgatgtggtgcgcgatgtgcatccgtcggtcttggccgtgaccggcccg
cacgccacggaagaagtgatgacagcggtgcatacccacctgcccaagccgcatgacccc
ttcgtcgacctggtgccggacatcggcgtgcgtctgacgcccaagcactacgcttatctg
aagatttccgagggctgcaaccaccgctgcaccttctgcatcatcccgtccatgcgcggc
gatctcgaaagccgccccatccacgacgtgctgcgcgaggccgagagcctggccaaggcc
ggcgtcaaggaaatcctggtgatctcgcaagacacctcggcctacggcgtggacaccaag
tacaaaatgggcttccacaacggccgcccggtgaagacccgcatgaccgagctgtgcgag
gagctgggccgccacggcatctgggtgcgcctgcattacgtctacccgtacccgcacgtg
gatgaagtcattccgctgatgcgcgacggcaagatcctgccctacctggacatcccgttc
cagcacgccagccagaaggtgctgaagctgatgaagcgcccggccaatagcgacaacgtg
ctggcgcgcatcaagaagtggcgcgaaatctgtccggcgctggtgatccgctccaccttc
atcgtcggcttccccggcgaaaccgaggaggacttcgaagagttgctggccttcatccgc
gaggccgagctggaccgcgtcggctgcttcacttactccccggtggaaggcgccacggcc
aacgagcttcccaatccggtgccggaagaggtgaaggaagcccgcaaggagcgcttcatg
gccgtgcaggccgaaatcagcgcgcgccggctggagcgccgggtcggccagaccctgcaa
gtgctggtggacgagatcgacgacgaaggcacggccgtgtgccgcagttatgccgacgcg
ccggaaatcgacggcctggtgttcgtcgaggacgccgccggcatgcagccgggcgagttc
taccaagtggagatcgtcgactgcagcgagcacgacctgtggggcgaacgccgctga
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