Capra hircus (goat): 102176447
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Entry
102176447 CDS
T02910
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
chx
Capra hircus (goat)
Pathway
chx03013
Nucleocytoplasmic transport
chx05014
Amyotrophic lateral sclerosis
chx05200
Pathways in cancer
chx05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102176447 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102176447 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
102176447 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102176447 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102176447 (TPR)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102176447 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
DUF5082
DUF1192
Imm70
Motif
Other DBs
NCBI-GeneID:
102176447
NCBI-ProteinID:
XP_005691036
EnsemblRapid:
ENSCHIG00000014240
UniProt:
A0A452EKT5
LinkDB
All DBs
Position
16:complement(66012968..66075092)
Genome browser
AA seq
2436 aa
AA seq
DB search
MPSSGSVSRNRQRGRPMASRSFDGSRRGSLRRAGAREPPSEEAEAAAQTSGSSGSSPFLS
VSAASTAAAAVHGPVDMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHE
KFKVESEQQYFEIEKRLSHSQERLVNETRECQSLRLELEKLNSQLKALTEKNKELEVAQD
RNIAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDFKRLNEKFKESNATKGELQL
KLDELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKC
NLENKKEEVSRMEEQMNGLKASNENLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIK
LSNLYKSAADDSEAKSNELTRAVDQLHRLLKSTGEASKGFQEHIIEVEESKDRMEKEMLE
KIRKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVE
TQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKE
IQRLQEDTDKANKHSSVLERDNQRMEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSA
DISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKISELQVKLE
NALAELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGVAIPLQASSLDDISLVSTPKR
SSTSQTASTPAPVIEPAEAIEAKAALKQLQEIFENYKKEKADNEKMQNEQLEKLQEQVTD
LRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQD
LRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGIL
ERSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNL
HLNTKELLKNAQKEIASLKQHLSNMEVQLASQSSQRTGKGQPSNKEDIDDLLSQLRQAEE
QVNDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEK
KLMEAEKEKQELQDDKRKAIESMEQQLSELKKTLNSVQNEVQEALQRASTALSNEQQARR
DCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETAQKAESQLLE
CKASWEERERMLKDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVSSMKEGVQGPLNVSL
SEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAER
EKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILP
LQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTK
RIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKENIQKELDAKIIDIQE
KVKTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKETLSQA
ETKSKSLENQVENLQKTLSEKEIEARSLQEQTLELQSELARLRQDLQDRTTQEEQLRQQI
TEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQY
EGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASMSDPPT
ANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQ
EAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHPQI
EPTNQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIETSDQI
SDDTVEMPLPKKLKSVTPVGTEEEVMAEESTDGEVETQVYTQDSQDSIGEGVTQGDYTPM
EDSEETSQSLQIDLGPLQSDQQTASSQDGQGKGDDVIVIDSDDEEEEEDENDGEHEDYEE
DEDDDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGES
NQRAADSQNSGEGNTGTAESSFSQEISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTI
HAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTD
GFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESG
GRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGDEVF
VEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVR
LQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7311 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcagtgtctagaaaccgccaaagaggacgacccatggcatcccga
agctttgacgggtcccgccgcgggagtctccggcgggcgggcgcgcgcgagccaccgagt
gaggaggccgaggcggccgcccagacttctgggtcctctgggtcttcgcctttcttgtcc
gtttctgctgcgtcgaccgctgccgccgcggtccacggcccagtcgacatggcggcggtg
ttgcagcaggtcctggagcgcacggagctgaacaagctgcctaagtccgtccagaacaaa
cttgagaagtttcttgctgaccagcagtccgagatcgacggcctgaaggggcggcacgag
aaatttaaggtggagagcgaacaacaatactttgagattgagaagagactgtcccacagt
caggagagacttgtaaatgaaacccgggagtgtcaaagcttgcggcttgagctagagaag
ctcaacagtcaattgaaggcacttaccgagaaaaacaaggaacttgaagttgctcaggat
cgcaatattgccattcagagccagtttacaaggacgaaggaagaattggaagctgagaaa
agagacttaattagaaccaatgagagactgtctcaagaacttgaatatttaacagaggat
tttaaacgtctaaatgaaaaatttaaggaaagcaatgcaacaaagggtgagcttcagtta
aaactggatgaacttcaagcttctgatgtttctgttaagtatcgagaaaagcgcctggag
caagaaaaggagttgttacacaatcagaatacttggctcaatacagagttgaaaaccaaa
actgatgaactcctggctctcggcagagaaaaaggaaatgagattctagagcttaaatgt
aatcttgaaaacaaaaaagaggaggtttctagaatggaagaacagatgaatggcctgaaa
gcatcaaatgagaatcttcaaaagcatgtagaggatctgttgaccaaactgaaagaggcc
aaggaacagcaggctagtatggaagagaaattccacaatgaattaaatgctcacataaaa
ctctctaacctttacaagagcgctgctgatgattcagaggcaaagagcaatgaactgacc
cgagcagtggaccagctacacagacttttgaagtcaactggagaagccagtaaaggattt
caagaacatatcatagaggtggaagaatctaaagatcgaatggaaaaagaaatgcttgag
aaaataaggaaattagagaaggaattagagaatgcaaatgacctgctttctgccacaaaa
cgtaaaggggccatcttatctgaagaagagcttgcagccatgtctcccactgcagcagct
gttgccaagatagtgaaacctggcatgaagttaactgagttgtataatgcttatgtggaa
actcaggatcagctgcttttggagaaactagaaaacaaaagaattaataagtatctagat
gaaatagtgaaagaagttgaagccaaagcaccaattttgaaacgccagcgtgaggagtat
gagcgtgcacagaaagctgtggcaagtttatccgttaagcttgaacaagccatgaaggag
attcagcgattgcaggaggacacagataaagccaataaacattcatctgtgcttgaaaga
gacaatcaaagaatggaagtacaaataaaagatctttcacaacagattagagtgcttctg
atggaacttgaagaagcgaggggtaaccatgtaatccgtgatgaggaagtaagctctgct
gatataagtagttcatctgaagtaatatcacagcatctagtatcttatagaaacattgaa
gagcttcaacagcaaaatcaacgtctcttagtggcccttcgggaacttggggaaaccaga
gaaagagaagaacaagaaacaacttcatccaaaatttctgagcttcaggtcaaacttgag
aatgccctcgctgaattggaacaactccgtgaatcacggcaacatcaaatgcagcttgtt
gattctatagttcgtcagcgtgatatgtaccgaattctgttgtcacagacaacgggagtt
gccattcctttacaggcttcaagcttagatgatatttctcttgtgtcaactccaaaacgt
tcaagtacatcacagactgcttccactcctgctccagtaattgagccagcagaggctata
gaagctaaggctgcacttaaacagctgcaggaaatttttgagaactacaaaaaagaaaag
gcagataatgaaaaaatgcagaatgagcagcttgagaaacttcaggagcaagtcacagat
ttgcgatcacaaaataccaaaatctctacccagctagattttgcttctaaacgttatgaa
atgctacaagataatgttgaaggataccgtcgagaaataacatccctacatgaaagaaat
cagaaactcactgcaacgactcagaagcaagaacagatcatcaacacaatgacgcaagat
ttgagaggcgctaatgaaaagctagctgttgcagaagtaagagcagaaaatctgaaaaag
gaaaaggaaatgcttaagttgtcagaagtccgtctttctcagcaaagagaatctttgttg
gccgaacaaagagggcaaaacttactgcttactaatctgcaaacaattcagggaatatta
gagcgatctgaaacagaaaccaaacaaaggcttagtagccagatagaaaaactggaacat
gaaatatcccatctaaagaagaagttggaaaatgaggtggaacagaggcatacacttact
agaaatctggatgttcaacttttagatacaaagagacagctggatactgagacaaatctt
catcttaacacaaaagaactgttaaaaaatgctcaaaaggaaattgcttcattgaaacaa
cacctcagtaatatggaagtccaacttgcttctcagtcttcacagagaactggtaaaggt
cagcctagcaacaaagaagatatagatgaccttctgagccagctaaggcaggcagaagag
caggtgaatgacttgaaggaaagactcaaaacaagcactagtaatgtggaacagtatcgt
gcaatggttacgagtttggaagagtccctcaacaaggagaaacaggtgacagaagaagtt
cgtaagaatattgaagttcgcttaaaagagtcagccgagttccagacacagctggagaag
aagctgatggaggcagagaaggagaaacaggaactgcaggatgacaagagaaaagccata
gagagcatggagcaacagttgtctgagttaaagaaaacactcaatagtgttcagaatgaa
gtacaagaagctcttcagagagcaagcacagctttgagtaatgaacagcaagccagacgg
gactgtcaggaacaagctaaaatagctgtggaagctcagaataagtatgagagagaattg
atgctgcatgctgctgatgttgaagctctccaagctgccaaggaacaggtttccaaaatg
gcctcagtgcgtcagcacttggaagaaacagcccaaaaagcagagtcacagttgttggaa
tgtaaagcatcttgggaagaaagagagagaatgttaaaggatgaagtttctaagagtgta
tctcgctgtgaagatctagaaaaacaaaacaggttacttcatgatcagattgaaaaatta
agtgacaaagtcgtttcctcgatgaaggaaggtgtacaaggtccattgaatgtatctctc
agtgaagaaggaaaatctcaagaacaaattttagaaattctcagatttatacgacgagaa
aaagaaattgctgaaactagatttgaagtggctcaagttgagagcctgcgatatcgacaa
agggttgaacttttagaaagagagctgcaggaacttcaggatagcctaaatgctgaaagg
gagaaagttcaggtaactgcaaaaacaatggcccagcatgaggaactgatgaagaaaacc
gaaacaatgaacgtagtcatggagaccaataagatgctgagagaagagaaggagaggctg
gaacaggatctacagcagatgcaagccaaggtcaggaaactggagttagatattttaccc
ttacaagaagcaaatgctgagctgagtgagaaaagtggtatgttgcaagcagagaagaag
ttattagaagaagatgtcaaacgttggaaagcacgtaaccagcatctagtgagtcaacag
aaagatccagatacagaagaatatcgtaagctgctctctgaaaaggaagttcacactaag
cgtattcagcaattgactgaagaaattggaagacttaaagctgaaattgcaagatcaaat
gcatctttgactaacaaccagaacttaatccagagtctaaaggaagatttaaataaagta
agaacagaaaaggaaaacatccagaaggagttagatgccaaaataattgatattcaagaa
aaggttaaaactattactcaagtcaagaaaattggacgtaggtacaagactcaatatgaa
gaacttaaagcacaacaagataaggtcatggagacctcagctcagtcttctggagaccat
caggaacagcacgtctcagtccaggaaatgcaggagctcaaagagacgctaagccaagct
gaaaccaagtcaaagtcacttgagaatcaagtggagaacctgcagaagactttatctgag
aaagagatagaagcaagaagtcttcaggaacagactctggagcttcagtctgaacttgca
cgacttcgtcaggaccttcaagatagaaccacacaggaagagcaactccgacagcagata
actgaaaaggaagaaaaaacaagaaaggccattgtagcagcaaaatcaaaaattgcacat
ttagctggtgtaaaagatcagctaactaaagaaaatgaagagcttaaacaaaggaatgga
gccttagatcagcagaaagatgaactggatgttcgtatgactgctcttaagtcccagtac
gaaggtcgaattagtcgcttggagagagaactcagggagcatcaagaaagacatcttgag
caaagagacgagcctcaggaacctaccaataaggtcccagaacagcagagacagatcacg
ttgaaaacaactccagcttctggtgaaagaggaattgccagcatgtcagacccaccaaca
gccaatatcaagccaacccctgttgtgtctacgccaagtaaagtgacagctgcagctatg
gctgggaataagtcaacacctcgagctagtatccgcccaatggttacacctgcaactgtt
acaaatcctactactaccccaacagccacagtgatgcccactacacaagtggaatcacag
gaagctatgcagtcagaagggcctgtggagcatgttccagttttcggaagcacgagtgga
tctgtccgttctaccagtcctaatgtccagccttctatccctcagcccattttaactgtt
cagcagcaaacacaggctacggcttttgtgcagcctactcaacagagtcatcctcagatt
gagcctacaaatcaagaactatccccaaacatagtggaggtggttcagagttcgccagtt
gagcggccttctacttccacagcagtatttggcactgtttcagctaccccaagttcttct
ttgccaaagcgtacacgtgaagaggaagaagacagcaccatagaaacatcagaccagatc
tctgatgatacagtggaaatgcctcttccaaagaagctgaaaagtgttacacctgtagga
actgaggaagaagttatggcagaagaaagtactgatggagaggtagagactcaagtatac
acccaggattctcaagattccattggagaaggagtcacccagggagattatacaccaatg
gaagacagtgaagaaacctctcaatctctacaaatagaccttgggcctcttcagtcagat
caacaaacagcttcatcccaagatggtcagggcaaaggagatgatgtcattgtaattgac
agtgatgatgaagaggaggaggaggatgaaaatgatggggaacatgaggattatgaagaa
gatgaagacgatgacgatgatgatgaagacgacacagggatgggagatgagggtgaggac
agtaacgaaggcactggtagtgcagacggcaatgacggatacgaggctgatgatgctgag
ggtggtgacgggactgatccaggtacagaaacagaagaaagtatgggtggaggtgaaagt
aatcagagagcagctgattctcaaaacagtggcgaaggaaatactggtactgcagagtcc
tctttttcccaggagatatctagagaacagcagccatcatcagcatctgaaagacagacc
ccccgagcccctcagtcaccaagacgcccaccacacccgcttcccccaagactgaccatt
catgctccacctcaggagctgggaccaccagttcagagaattcagatgactcgaaggcag
tctgtaggacgtgggcttcagctgactccaggaataggtggcatgcagcagcattttttt
gatgatgaagatagaacagttccaagtaccccaactcttgtggtgccacatcgtactgat
ggatttgctgaagcgattcattccccacaggttgctggtgttcctagattccggtttggg
ccacctgaagatatgccacaaacgagttctagtcactctgatcttggccaacttgcttct
caaggaggtttgggaatgtatgaaacaccccttttcctagctcatgaagaggagtcaggt
ggccgaagtgttcctactactcctctgcaagtagcagccccagtgaccgtatttactgag
agcaccacctccgatgcctcagagcatgcttcgcagtctgttccaatggtgacaacatcc
actggtactttatccacaacaaacgaaacagcaacaggtgatgatggagatgaagtattt
gtggaggcagaatctgaaggtattagttcagaagcaggcctcgaaattgatagccagcag
gaagaagagcctgttcaggcctctgatgagtcagatcttccttccaccagccaggaccct
ccttccagttcttctgtagatactagcagtagtcagccgaagcctttcagacgagtaaga
cttcagacgacattgagacaaggtgtccgtggtcgccagtttaacagacagagaggtgtg
agccatgcaatgggagggagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system