Capra hircus (goat): 102190609
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Entry
102190609 CDS
T02910
Symbol
POLR1A
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
chx
Capra hircus (goat)
Pathway
chx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102190609 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chx03021
]
102190609 (POLR1A)
Enzymes [BR:
chx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102190609 (POLR1A)
Transcription machinery [BR:
chx03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102190609 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
102190609
NCBI-ProteinID:
XP_017910857
EnsemblRapid:
ENSCHIG00000018204
LinkDB
All DBs
Position
11:48350620..48437096
Genome browser
AA seq
1720 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFTHCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVVHLL
LCQLRVLEVGALQAVYELERILYRFLEENADPTACEIQEELEQYTIEILQNNLLGSQGAQ
VKNVCESRSKLISVFWKVHMTAKRCPHCKTGRSVIRKEHNSKLTITYPAMVHRRADQKDT
EPQGIEEAQMGKRGYLTPSSAQEHLIALWKNEGFFLNYLFLGLEDVGMESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQELPSEVAAPTT
EEEKDSSMAMDRSFLSQLPGQSLTDRLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSSSDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARVLPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFSREQYMELVYRG
LTDKVGRVKLLPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKIGGKAWVKES
PRPVPGFNPDSMCESQVIIRAGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTC
LARLFTAFLQLYRGFTLGVEDILVKPKADVRRHGIIKESTHCGPRAVRAALNLPEAASCD
EVQGKWQDAHLNKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAVKKWHSKHS
NALLRKGAFLNYSQKIQAAVKALNLEGTNQNGRTPETYQMLRMWAELDEQSRRKYQKKAA
PCPDPSLSVWRPDIYFASVSETFEKKMDDYSCEWAAQAERSYEKSGLSLDSLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVFNTKKALKKVKSLKKQLTRVCLGEVLEKIDVQESFYMGEKQNKFRVYKLRFQ
FLPHAYYQQEKCMRPEDILHFMETRFFKILMEAIRKKNSKASAFRSVNTRRATQRDLDSA
GESERSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYDSEEEEEEEEKED
DEKEDEDVQEERTGLKEDVQQEQEEGGWAPEESSLPSAPLMQPQKRARSREPQEAEAVAR
RAQAVRECHPFIEDYQYDTQGGLWCQVTLKLPLMKVNFDMSSLVXSLAQGAVIYATRGIT
RCLLNETTNSKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRV
IEKEIKDVFAVYGITVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQF
LKQATLLGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggccgaagaactcaagaaattaagtgtgaagtccattacgaaccctcggtacctggac
agcctggggaacccctcggtaaatggcctgtatgatttagctctgggccccgccgactcc
aaagaggtgtgctccacttgcgtgcaggacttcacccactgctctgggcacttgggccac
atcgagctcccgctcaccgtgtacaaccctctcctcttcgataaactctacctgttgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggctgtggttcacctctta
ctctgccagctgagagtcctggaagttggggccctgcaagcagtgtatgagctggagaga
attctctacaggtttctggaagaaaatgctgatcctactgcctgtgaaattcaggaagag
ctagaacaatatacaatcgaaatcctgcagaacaacctcctgggatcccagggtgcacaa
gtgaaaaatgtctgtgagagcaggagcaaactcatctctgtcttctggaaggtacatatg
actgctaagagatgtccccactgcaaaactgggcggtcagtgatccgaaaggagcacaat
agcaaactgaccatcacgtatccggccatggtgcacaggagagctgaccagaaggacact
gaaccccagggaattgaggaagctcagatgggaaaacgaggatacctgacaccctccagt
gctcaagaacacctcatagctctttggaaaaatgaagggttctttctgaattaccttttt
ttgggactggaagatgttggcatggagtccaggtttaaccccagtatgttctttctggat
ttcttggtggtaccaccctcaaggtatcgccctgtcaaccgccttggggaccagatgttc
accaacgggcagacggtgaacttgcaggctgtcatgaaggacgtggttctgatccgaaaa
cttctggcactgatggcccaagaacaggagctgccaagtgaggtggcagcacccaccaca
gaagaggaaaaagactcttcgatggctatggaccgatcctttttgagtcagcttccaggc
cagtccctcacagacagactttacaacatttggattcgccttcagagccacgttaatatt
gtgtttgatagcgagatggacaaattaatgatggaaaagtaccccggtattagacagatc
ctggagaagaaggatggtttgttccgaaagcacatgatggggaagcgcgtcgactacgca
gcccgctcggtcatctgcccggacatgtacatcaacaccaacgaaattggaattcccatg
gtgtttgccacaaagctgacctaccctcaaccagtcaccccctggaacgtgcaggaactg
aggcaggccgtcatcaatggccccaacgtgcaccccggagcctccatggtcatcaatgag
gatggcagtcgcacagccctgagctcctcagacctcacgcagcgggaggccgtggccaaa
cagctcctgacaccagctacaggggcccctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaacggggacattctcctcctgaaccggcagcccaccctgcacaggccctcc
atccaggcgcatcgcgcccgcgtcctccctgaggagaaagtcctgcggctccactatgcc
aactgcaaggcctacaacgccgacttcgatggagatgagatgaacgcccacttcccccag
agtgaactgggccgggccgaggcctacgtcctggcctgcaccgatcagcagtaccttgtt
cccaaggatggccagccattggcggggctgatccaagatcacatggtttcaggggcaaac
atgaccattcgaggctgctttttcagccgggagcagtatatggagctggtgtaccgagga
ctcacggacaaagtggggcgtgtgaagctccttcctcctgccatcctgaagccctttcct
ctgtggacaggaaagcaggttgtgtccacattgctcatcaacataatcccagaggaccat
atccccctgaacttgtcaggaaaggcaaagatcggcggaaaggcctgggtgaaggagtct
cctcggcccgttcccggctttaaccccgactccatgtgcgagtcccaggtgatcatcaga
gcaggggagctgctgtgcggggtgctggacaaggcgcactacgggagctccgcctacggc
ctggtccactgctgctacgagatctacggtggggagaccagcggcagggttctcacctgc
ctggctcgcctcttcaccgccttcctgcagctctacagaggcttcaccttgggagtagaa
gacattttggtcaagccaaaggcggatgtcaggagacatggaatcattaaagagtccacc
cactgtgggccacgggccgtcagggctgcgttaaacctgccagaggcagcgtcatgtgat
gaggtccaagggaaatggcaggatgcccatctgaataaagaccagagggattttaacatg
attgacctgaagttcaaggaggaagtgaaccattacagcaatgaaattaataaggcatgc
atgcccttcggtctgcacagacagttcccagagaacaatctgcagatgatggtgcagtct
ggggccaaaggttcgacagtgaacaccatgcagatttcgtgcctgctgggccagatcgaa
ttggaaggtcggagacccccgctcatggcatccggcaagtctttgccctgcttcgagcct
tatgaattcacccccagggctggcggcttcgtcactggcaggttcctcactggcatcaag
cctccggagttcttcttccactgcatggccgggcgagagggtctggtggacactgctgtg
aagaccagccgttccggctacctccagaggtgcatcatcaaacacctggaggggctggtt
gtccagtatgacctgacagtccgcgacagtgacggcagcgtggtgcagttcctgtacggg
gaggacggcctggacatccccaagacacagttcctgcagcctaagcagttccccttcctc
gccagcaactatgaggtaataatgaaatcgaagcatctccatgaagttttatccagagcg
gatccccagaaagctctccgtcacttcagagccgtcaaaaaatggcacagcaagcattcc
aacgccctcctgaggaaaggcgccttcttgaattactcccagaaaattcaggcggctgtg
aaagccttgaaccttgagggcacaaaccagaacggccgcacccccgagacttaccagatg
ctgaggatgtgggctgagttagatgaacaaagccggaggaagtaccagaagaaggcggct
ccttgtcctgaccccagtctgtctgtctggcgcccagacatctactttgcatccgtgtca
gaaacatttgaaaagaagatggacgactacagctgtgagtgggcagctcaggcagagagg
agttacgagaaatcggggctttctcttgacagtttgaggactctgctgcagctcaagtgg
cagcgctcactatgcgacccgggtgaggccgtgggcctgctggccgcccagagcatcggg
gagccctccacacagatgacgctgaacaccttccactttgccggcagaggcgagatgaac
gtcaccctgggcattccgaggttgcgggaaatcctcatggtggccagtgccaacatcaag
acgccgatgatgagtgtacctgtgttcaataccaagaaagcgctgaagaaagtgaaaagc
ctgaagaagcaactcaccagagtgtgtctcggggaggtgttggagaaaattgatgtccag
gagtccttctatatgggggagaaacagaacaagttccgggtatacaagctgcgatttcag
ttcctgccacacgcgtactaccagcaggagaagtgcatgaggcccgaggacatcttacac
ttcatggaaaccagattctttaaaattctgatggaagccatcaggaagaagaacagtaaa
gcatcagctttcagaagtgtgaacacacggagagccacccagcgggatctagacagtgct
ggcgagtcggagaggagtcggggagagcaggagggcgacgaggaagaggaggggcacatt
gtggacgctgaagctgaggagggcgatgctgatgcctcggatgccaaacgcaaggaaaaa
caagaggaggaggtcgactacgacagcgaggaggaagaggaggaggaggagaaggaagac
gacgagaaggaggacgaggacgttcaggaggaaaggaccggcctcaaagaagacgttcag
caggagcaggaggaaggcggctgggcccccgaggagagctcgctccccagcgcccccctg
atgcagccacagaagcgcgcccgaagccgggagccccaggaggccgaggcagtggcgcgc
cgggcgcaggcggtgcgcgagtgccacccgttcatagaggactaccagtacgacacacag
ggcggcctgtggtgccaggtgacgctgaagctccctctcatgaaggtcaactttgacatg
agctccctggtgncatccttggcccaaggagctgtcatctatgcaaccaggggtatcaca
aggtgcctcctgaatgaaaccaccaacagtaagaatgagaaggagcttgtcttaaacaca
gaaggcatcaacctcccggagctgttcaagtacgccgaggtactggatctgcgccgtctc
tattccaacgacatccatgccatggccagcacgtacggcatcgaggctgcactgcgcgtg
attgaaaaggagatcaaggacgtgtttgccgtatatggcatcaccgttgacccccgccac
ctctcgctggtggctgactacatgtgcttcgagggtgtttacaagccactgaaccgcttt
gggatccggtcaaactcctcaccactgcagcagatgacgtttgagaccagcttccagttt
ctgaagcaggccaccctcctgggatcccatgacgaactgaggtccccatcagcctgcctc
gtggtcgggaaggtcgtcaagggtgggaccggcctcttcgagctcaagcagccactaaga
tag
DBGET
integrated database retrieval system
