Croceimicrobium hydrocarbonivorans: H4K34_14170
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Entry
H4K34_14170 CDS
T07152
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
chyd
Croceimicrobium hydrocarbonivorans
Brite
KEGG Orthology (KO) [BR:
chyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chyd03009
]
H4K34_14170 (rimO)
Enzymes [BR:
chyd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H4K34_14170 (rimO)
Ribosome biogenesis [BR:
chyd03009
]
Prokaryotic type
ribosomal protein modification factors
H4K34_14170 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QNR23515
UniProt:
A0A7H0VCR7
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All DBs
Position
3137467..3138765
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AA seq
432 aa
AA seq
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MRTKHRKKNKINIVTLGCSKNLYDSEVLMGQLKANQKEVVHEEEGNIVVINTCGFIENAK
EESINTILEFVERKEEGEVDKVFVTGCLSERYKPDLEKEIPNVDQYFGTRELPLLLKALG
ADYKKELVGERLSTTPQHFAYLKIAEGCDRPCSFCAIPLMRGGHKSTPIEDLVTETQKLA
AKGVKELLLIAQDLTYYGLDLYKKRALADLLKELVKVEGIQWIRLHYLFPTGFPEEVLDL
IREEPKICNYIDIPLQHIADPVLKSMRRGTTKERTDKLLRLMREKVPGIAIRTTLIVGYP
GETEEDFQVLKEWVKEMRFERLGVFTYSHEENTHAYNLEDDVPAEIKQERANEVMAIQQK
ISAEHNQAMVGQKYRVLIDRKEGDFFIGRTELDSPDVDNEVLVEAEYLPIGEFVEVEITG
AEDYDLFAVVVE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactaaacaccgcaagaagaataaaatcaatatcgttaccctaggttgttctaaa
aacctgtatgatagtgaggtattgatggggcagttgaaggccaaccagaaagaggtggtc
catgaagaggaaggaaatattgtggtgattaatacctgtggctttattgagaatgccaag
gaagaatccattaataccattcttgaatttgttgaacgcaaagaagaaggagaggtagac
aaggtttttgttaccggatgtttatctgagcgctataaacccgatttggagaaagaaatt
cctaatgtggatcagtatttcgggactcgcgaactacccttgttattgaaagccttagga
gctgattataagaaggaattggtaggtgagcgtttaagcactacaccccagcattttgcc
tatttaaagattgccgagggttgtgaccgaccttgttcattctgtgcgattcccttaatg
cgcggtggtcataaatctacccccattgaggacttggtaaccgaaactcaaaaattagcc
gccaaaggtgttaaggagcttttattgattgctcaggatctcacctattatggattggat
ctgtataagaagcgtgccttggctgatttattaaaggaattagtgaaggtggaaggaatc
caatggattcgtttacactatttattccctaccggtttcccggaggaggtactcgattta
attcgtgaggaacccaagatttgcaattacattgatattccactgcagcatattgccgat
ccggtattgaagtctatgcgtcgtggtactaccaaggaacgcaccgataaactattgcgt
ttgatgcgggagaaggtaccgggcattgccattcgtactaccttaattgttggttatcct
ggcgaaacggaagaggacttccaggtattgaaggaatgggtgaaagaaatgcgtttcgag
cgcctaggtgtctttacttactctcatgaggaaaatacccatgcttataatttagaggat
gatgtgcctgctgaaattaagcaggagcgtgcgaatgaagtaatggccatccagcagaag
atttcagcggagcataatcaggccatggtagggcagaagtatagagtgcttatcgaccgt
aaggaaggcgatttcttcatcggtcgtactgagcttgattcccctgatgtggacaatgaa
gtactggtagaagcagaatatctacctatcggtgaattcgttgaagtggaaattaccggc
gccgaagattacgatctctttgccgtcgtagtggaataa
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