Citrobacter sp. TSA-1: HF677_000925
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Entry
HF677_000925 CDS
T09275
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HF677_000925 (hmsP)
Enzymes [BR:
cib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
HF677_000925 (hmsP)
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
UL41A
Motif
Other DBs
NCBI-ProteinID:
QKE18302
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All DBs
Position
199932..201938
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMAMVAAVVMVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSGT
ILKGDIPEAEAILRSIRPAGVVSRADVVLPNQFQALRMSFIPERPVPVTVTRLFELPVQI
SLPVYSLERSANPQPLAYLVLQADSYRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINR
LILHPLRKIARELNDIPQQDLIGYQLALPRLHQDDEIGLLVRSYNLNQQLIQRRSEEQSD
HSMRFPVSELPNKSFLMALLEQVVNRQQTTALMIVTCETLRDTAGVLSETQREILLLTLV
EKLKSVLAPRMVLTQVSGYDFAIIAHGVKEPWHAITLGQQVLTIVNERLPIQGIQLRPTC
NIGVAMFNGDLTAEQLYHRALSAVLTSRHKGKNRIQFFDPLQMEEAQQRLTEENDILTAL
DNHQFALWMQPQVEMSSGKVLSAEALLRMQQPDGSWELPEGLIDRIESCGLMVTVGYWVL
EETCRQLSAWQERGLMLPLSVNLSALQLMHPSMVSDLLELLNRYRIKPGTLILEVTESRH
IDDPNAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDVLKIDKMFVDGVPED
CSMISAIIQLAHSLNLQMIAEGVETEAQREWLSQAGVEVAQGFLFARPVPANIFEERYLT
PKNADYKS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgtcagtcgctcgttaacaattaagcagatggcaatggttgcggccgttgtcatg
gtgtttgtgtttattttttgcaccgttttgttgttccatctggtccagcagaatcgctac
aacacggctacgcaactggaaagtatcgctcgctccgtccgtgaacctctgtcgggcacg
atcctgaaaggggatattcccgaagcagaagctattttaagaagtattcgaccagcaggc
gtggtcagccgcgccgatgtggtgcttcccaatcagtttcaggcgctgcggatgagcttt
attcctgaacgcccggttccggttacggtgactcgcctgtttgaacttccggtacaaatt
tcgctgccggtctattctcttgagcgttcagcgaatccgcaaccgctggcgtatctggtg
ctacaggcggattcgtaccgtatgtacaagttcgtgatgagtacgctctcaacgttagtg
accatttacttacttctctcgttaatactcacggtagccatctcatggtgtattaacaga
ttgattttgcatccattacgtaaaatagcgcgtgagctgaacgacattccccagcaggat
ctgattggctatcagctggcattgccgcgtctgcatcaggacgacgagattggcctgctg
gtgcgtagctacaacctcaatcagcaactgattcagcgccgcagtgaagagcaaagcgac
cattcaatgcgattcccggtttctgagctgcccaacaagtcgtttctgatggcgctgctg
gagcaggttgtgaatcgtcagcagactacggcgctgatgattgtcacctgcgaaacccta
cgtgataccgcgggtgtgttatccgagacccagcgggaaatcctgctgcttacgctggtt
gaaaagctgaagtcagtattggcccccagaatggtgcttacccaggtgagcggctatgac
tttgccatcatcgcacatggtgtgaaagaaccctggcatgctattacgctaggtcagcaa
gtgctcactatcgttaacgagcgattaccgattcagggtattcaactccgtcctacctgc
aacattggggtggcgatgtttaatggcgatttgaccgcagaacagctttaccaccgcgca
ctctcagctgtgttaacgtcgcgtcacaagggtaaaaaccggattcagttctttgacccg
ttgcagatggaagaggcgcaacagcgtttgacggaagagaacgatattcttaccgcgctg
gataaccatcagtttgcgctctggatgcagccgcaggtggagatgtccagcggtaaggta
ttgagcgcagaagcattattgcgaatgcagcagccagacggaagctgggagctgccagaa
gggttaatcgacaggattgagtcctgtggcctgatggtgacggtcggttactgggtgctg
gaggagacatgtcgccagctgtcagcctggcaggaacgcggcctgatgctgccgctctcg
gtgaacctgtctgcgctacagctgatgcatccgagtatggtgtcggatctgctggaattg
ctaaaccgctatcgcatcaagcctgggacgttgattctggaagtgaccgaaagccggcac
attgatgatcctaatgccgctgtggctattttacgcccgctgcgcaacgcgggcgtgcgt
atcgcgctggacgattttggtatggggtatgcgggcctgcggcagctgcagcacatgaag
tcgctcccggtggatgtactcaaaatcgataagatgtttgtcgatggcgtccctgaagat
tgcagcatgatctccgccatcattcagttggcgcatagcctcaatttgcagatgatcgct
gagggcgtcgaaaccgaagcgcaacgcgaatggttatcacaagcgggggtagaagtggca
caagggttcctgtttgcccggccggttccggcgaatatcttcgaagaacgttatctgacg
ccgaaaaacgctgattacaaaagttaa
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