KEGG   Citrobacter sp. TSA-1: HF677_003805
Entry
HF677_003805      CDS       T09275                                 
Name
(GenBank) ornithine decarboxylase
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
cib  Citrobacter sp. TSA-1
Pathway
cib00330  Arginine and proline metabolism
cib00480  Glutathione metabolism
cib01100  Metabolic pathways
cib01110  Biosynthesis of secondary metabolites
cib04148  Efferocytosis
Module
cib_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:cib00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    HF677_003805
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    HF677_003805
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    HF677_003805
Enzymes [BR:cib01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     HF677_003805
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase
Other DBs
NCBI-ProteinID: QKE18838
LinkDB
Position
794813..796948
AA seq 711 aa
MKSMKIAASSELVSRLSSHRQVVSLDSTDFTDVAAVVITVADSRSGILALLKRTGFHLPV
FLFAESDVDVPAGVNAVIRGQAQDWLELESAACQYEEELLPPFYDTLTQYVEMGNSTFAC
PGHQHGEFFKKHPAGRHFYEFFGENLFRADMCNADVKLGDLLIHEGSAKHAQKFAAKVFH
ADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEAARNP
FGFIGGIDEHCFDEEYLRQQLREVAPQKADQPRPFRLAIIQLGTYDGTIYNARQVIDKIG
HLCDYILFDSAWVGYEQFIPMMADGSPLLLELNANDPGIFVTQSVHKQQAGFSQTSQIHK
KDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVTLG
IEARKAIITRCKLLQPFIPPVVDGKPWESYPTQVIASERRFFSFEPGAKWHGFSGYARDQ
YFVDPCKLLLTTPGIDAQTGQYTEFGIPATILAHYLRENGIVPEKCDLNSILFLLTPAES
AEKLAQLVAMLAQFEQHIEDDTPLANVLPTIFNKYPVRYRDYTLRELCQEMHSLYVSFDV
KDLQKAMFRQESLPTVAMNPQDANSAFIRGDVELVRICDAAGRIAAEGALPYPPGVLCVV
PGEVWGGAVQRYFLALEEGINLLPGFSPELQGVYGETDADGIKRLYGYVLK
NT seq 2136 nt   +upstreamnt  +downstreamnt
atgaaatcaatgaaaattgccgccagtagtgaactggtttctcgtctgtccagccatcgt
caggtggtgtcgctggacagtactgattttactgacgttgcggcagtcgtcattaccgtt
gcggacagccgcagtgggatcctggctttgctgaaacgcaccggttttcatctacctgtg
tttctgttcgcagagtctgatgttgatgtgcctgcgggcgttaatgcggtaattcgcggt
caggctcaggactggctggagctggaatctgctgcctgtcagtatgaggaagagctgctg
ccgccgttctatgacacgcttacccagtatgtcgaaatggggaacagcacgtttgcctgc
ccgggacaccaacacggtgagttttttaagaagcatcctgcgggccgacatttctatgag
ttctttggtgagaatctgtttcgcgcggatatgtgcaatgctgacgttaagcttggcgat
ctgttgattcatgaaggatcagcgaaacatgcgcagaaatttgccgcgaaagttttccac
gcggataaaacctactttgtgctgaatgggacctctgcggccaataaagtggtcaccaat
gcgctgctgacgcgcggcgatctggtgctgtttgaccgcaataatcataaatcgaaccac
cacggggcgctgatccaggcgggtgctacgccggtttatctggaagcggcgcgtaatccg
tttggctttattggcggcattgatgagcactgctttgatgaggagtatctgcgccagcaa
cttcgagaagttgcgccgcaaaaggctgatcaaccgcgcccgttccgtctggcgatcatt
cagttgggtacctatgacggtacgatctacaacgcccggcaggtgatcgacaagatcggt
cacctgtgcgattacatcctgtttgattccgcatgggtcggttacgagcaatttattccg
atgatggccgatggttcaccgctgctgctggagctcaatgctaacgatccggggattttt
gtcactcagtcggtacacaaacagcaggccggattctcgcaaacctcgcagatccataaa
aaggataaccatattcgcggccaggcgcgcttctgcccgcataagcgtctgaacaatgcg
tttatgctgcatgcttccaccagcccgttttacccgctgtttgcggcgctggacgttaac
gccaaaatccatgaaggcgagagcggccgtcggctatgggcggaatgtgtgacgctgggg
atcgaggcccgcaaagcgattattacccgctgtaagctgcttcaaccgtttattcctccg
gtagtagatggcaaaccgtgggaaagctatccgacacaggtgattgccagcgagcgtcgc
ttctttagctttgaacctggtgctaaatggcatggtttttctggatatgcacgcgaccag
tattttgtcgatccctgcaaactgctgttaaccactccgggcattgatgcgcaaactggg
caatatactgagtttggtattccggcgacgattttggcgcattatctgcgtgaaaacggt
atcgtgccggagaaatgcgaccttaactcgattctgttcctgctgaccccggcagaaagc
gctgagaaactggcgcaactggtcgcgatgctggcgcagtttgaacaacatattgaagac
gatacgccgctggcaaacgtgctgcccaccatcttcaacaagtatccggtacgttaccgg
gattacacgctgcgtgaactgtgtcaggagatgcactcactgtacgtcagctttgatgtg
aaagatctgcaaaaagcgatgttccgtcaggagagtttacctaccgtggcgatgaaccca
caggatgctaacagcgcctttatccgcggtgatgttgaactggtgcgtatttgtgatgcc
gctggtcgcattgcggcagaaggcgcgctgccttatcctccgggcgtactgtgcgtggta
ccgggcgaagtatggggcggggcggtgcaacgttacttcctggcattggaagagggcata
aacctgctgccgggcttctcgccggagctgcaaggggtttacggtgaaacggatgcagac
ggtattaaacgtctgtatggatatgttctgaagtaa

DBGET integrated database retrieval system