Citrobacter sp. TSA-1: HF677_003805
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Entry
HF677_003805 CDS
T09275
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib00330
Arginine and proline metabolism
cib00480
Glutathione metabolism
cib01100
Metabolic pathways
cib01110
Biosynthesis of secondary metabolites
cib04148
Efferocytosis
Module
cib_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
HF677_003805
09106 Metabolism of other amino acids
00480 Glutathione metabolism
HF677_003805
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
HF677_003805
Enzymes [BR:
cib01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
HF677_003805
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QKE18838
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Position
794813..796948
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AA seq
711 aa
AA seq
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MKSMKIAASSELVSRLSSHRQVVSLDSTDFTDVAAVVITVADSRSGILALLKRTGFHLPV
FLFAESDVDVPAGVNAVIRGQAQDWLELESAACQYEEELLPPFYDTLTQYVEMGNSTFAC
PGHQHGEFFKKHPAGRHFYEFFGENLFRADMCNADVKLGDLLIHEGSAKHAQKFAAKVFH
ADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEAARNP
FGFIGGIDEHCFDEEYLRQQLREVAPQKADQPRPFRLAIIQLGTYDGTIYNARQVIDKIG
HLCDYILFDSAWVGYEQFIPMMADGSPLLLELNANDPGIFVTQSVHKQQAGFSQTSQIHK
KDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVTLG
IEARKAIITRCKLLQPFIPPVVDGKPWESYPTQVIASERRFFSFEPGAKWHGFSGYARDQ
YFVDPCKLLLTTPGIDAQTGQYTEFGIPATILAHYLRENGIVPEKCDLNSILFLLTPAES
AEKLAQLVAMLAQFEQHIEDDTPLANVLPTIFNKYPVRYRDYTLRELCQEMHSLYVSFDV
KDLQKAMFRQESLPTVAMNPQDANSAFIRGDVELVRICDAAGRIAAEGALPYPPGVLCVV
PGEVWGGAVQRYFLALEEGINLLPGFSPELQGVYGETDADGIKRLYGYVLK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaatgaaaattgccgccagtagtgaactggtttctcgtctgtccagccatcgt
caggtggtgtcgctggacagtactgattttactgacgttgcggcagtcgtcattaccgtt
gcggacagccgcagtgggatcctggctttgctgaaacgcaccggttttcatctacctgtg
tttctgttcgcagagtctgatgttgatgtgcctgcgggcgttaatgcggtaattcgcggt
caggctcaggactggctggagctggaatctgctgcctgtcagtatgaggaagagctgctg
ccgccgttctatgacacgcttacccagtatgtcgaaatggggaacagcacgtttgcctgc
ccgggacaccaacacggtgagttttttaagaagcatcctgcgggccgacatttctatgag
ttctttggtgagaatctgtttcgcgcggatatgtgcaatgctgacgttaagcttggcgat
ctgttgattcatgaaggatcagcgaaacatgcgcagaaatttgccgcgaaagttttccac
gcggataaaacctactttgtgctgaatgggacctctgcggccaataaagtggtcaccaat
gcgctgctgacgcgcggcgatctggtgctgtttgaccgcaataatcataaatcgaaccac
cacggggcgctgatccaggcgggtgctacgccggtttatctggaagcggcgcgtaatccg
tttggctttattggcggcattgatgagcactgctttgatgaggagtatctgcgccagcaa
cttcgagaagttgcgccgcaaaaggctgatcaaccgcgcccgttccgtctggcgatcatt
cagttgggtacctatgacggtacgatctacaacgcccggcaggtgatcgacaagatcggt
cacctgtgcgattacatcctgtttgattccgcatgggtcggttacgagcaatttattccg
atgatggccgatggttcaccgctgctgctggagctcaatgctaacgatccggggattttt
gtcactcagtcggtacacaaacagcaggccggattctcgcaaacctcgcagatccataaa
aaggataaccatattcgcggccaggcgcgcttctgcccgcataagcgtctgaacaatgcg
tttatgctgcatgcttccaccagcccgttttacccgctgtttgcggcgctggacgttaac
gccaaaatccatgaaggcgagagcggccgtcggctatgggcggaatgtgtgacgctgggg
atcgaggcccgcaaagcgattattacccgctgtaagctgcttcaaccgtttattcctccg
gtagtagatggcaaaccgtgggaaagctatccgacacaggtgattgccagcgagcgtcgc
ttctttagctttgaacctggtgctaaatggcatggtttttctggatatgcacgcgaccag
tattttgtcgatccctgcaaactgctgttaaccactccgggcattgatgcgcaaactggg
caatatactgagtttggtattccggcgacgattttggcgcattatctgcgtgaaaacggt
atcgtgccggagaaatgcgaccttaactcgattctgttcctgctgaccccggcagaaagc
gctgagaaactggcgcaactggtcgcgatgctggcgcagtttgaacaacatattgaagac
gatacgccgctggcaaacgtgctgcccaccatcttcaacaagtatccggtacgttaccgg
gattacacgctgcgtgaactgtgtcaggagatgcactcactgtacgtcagctttgatgtg
aaagatctgcaaaaagcgatgttccgtcaggagagtttacctaccgtggcgatgaaccca
caggatgctaacagcgcctttatccgcggtgatgttgaactggtgcgtatttgtgatgcc
gctggtcgcattgcggcagaaggcgcgctgccttatcctccgggcgtactgtgcgtggta
ccgggcgaagtatggggcggggcggtgcaacgttacttcctggcattggaagagggcata
aacctgctgccgggcttctcgccggagctgcaaggggtttacggtgaaacggatgcagac
ggtattaaacgtctgtatggatatgttctgaagtaa
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