Citrobacter sp. TSA-1: HF677_005435
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Entry
HF677_005435 CDS
T09275
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib00250
Alanine, aspartate and glutamate metabolism
cib00280
Valine, leucine and isoleucine degradation
cib00310
Lysine degradation
cib00410
beta-Alanine metabolism
cib00640
Propanoate metabolism
cib00650
Butanoate metabolism
cib01100
Metabolic pathways
cib01120
Microbial metabolism in diverse environments
Module
cib_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HF677_005435 (gabT)
00650 Butanoate metabolism
HF677_005435 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HF677_005435 (gabT)
00280 Valine, leucine and isoleucine degradation
HF677_005435 (gabT)
00310 Lysine degradation
HF677_005435 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HF677_005435 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cib01007
]
HF677_005435 (gabT)
Enzymes [BR:
cib01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
HF677_005435 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
HF677_005435 (gabT)
2.6.1.48 5-aminovalerate transaminase
HF677_005435 (gabT)
Amino acid related enzymes [BR:
cib01007
]
Aminotransferase (transaminase)
Class III
HF677_005435 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
AP_endonuc_2
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QKE19145
LinkDB
All DBs
Position
complement(1138527..1139810)
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AA seq
427 aa
AA seq
DB search
MSTNKELMQRRSNAVPRGVGQIHPIFAERAENCRVWDVEGREFLDFAGGIAVLNTGHLHP
QIVSAVEAQLKKLSHTCFQVLAYEPYLELCEIMNKKVPGDFAKKTLLVTTGSEAVENAVK
IARAATKRTGTIAFSGAYHGRTHYTLSLTGKVNPYSAGMGLMPGHVYRALYPCPLHGISE
DDAIASIHRIFKNDAAPEDVAAIVIEPVQGEGGFYAASPAFMQRLRAICDEHGIMLIADE
VQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAIPPGGLGGTYAG
NPIACAAALAVLNIFEQENLLQKANELGQTLREGLLAIAESHREIGDVRGLGAMIAIELF
EDGDHTKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLDIIAQC
FAEAKQG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaacaaagaacttatgcaacgtcgcagcaacgccgttccccgtggcgtagga
caaatccaccctatttttgccgagcgtgcagaaaactgtcgagtctgggacgttgaaggc
cgtgaattcctcgattttgctggcggtattgcggtgctgaacaccggccacctgcacccg
cagatcgtctctgcggtagaagcacagttgaaaaagctttcccatacctgttttcaggtg
ctggcctatgagccgtacctggagctgtgcgaaatcatgaataagaaagtgccgggcgat
ttcgccaaaaaaaccctgctggtgacaaccggctcggaagcggtggaaaacgcggtgaaa
atcgcccgcgccgccaccaaacgaaccggcactatcgccttcagcggcgcttaccacggt
cgaacccactacaccctgtcgctgaccgggaaagtaaacccgtactctgcaggaatggga
ctgatgccgggccacgtgtaccgtgcgctttatccttgcccgctgcacggcatcagtgaa
gacgatgctatcgccagcattcaccgtatcttcaaaaatgatgccgctccggaagatgtt
gccgccatcgtgattgagcccgtccagggcgaaggtggtttttacgccgcctctcctgct
tttatgcaacgtctgcgcgccatttgtgacgagcacggcatcatgctgattgccgatgaa
gtacagagcggcgcaggccgtaccggtacgctgttcgctatggagcagatgggcgttgcg
cccgatctcaccaccttcgccaaatctattgccggtggcttcccgctggcgggagtgacc
gggcgcgccgaagtcatggacgctatcccaccgggcggtctgggcggtacctatgccggt
aacccgattgcctgcgccgccgcactggcggtactgaatattttcgaacaggaaaatctg
ctgcaaaaagccaacgagctgggtcaaaccctgcgcgaaggcctgctggctatcgcggaa
agccaccgcgagattggcgatgtacgcgggctgggagcgatgatcgcaatcgaactgttt
gaagacggcgatcacacgaaaccagacgccaaactgactgcggaaatcgtcgcgcgtgcg
cgcgataaagggctgatcctgctctcctgcggaccttactacaacgtactgcgcattctt
gtcccactgaccattgaagatgcccaaatccgccaggggctggacattatcgctcagtgt
tttgccgaagcgaagcagggttaa
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