Citrobacter sp. TSA-1: HF677_017815
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Entry
HF677_017815 CDS
T09275
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib00730
Thiamine metabolism
cib01100
Metabolic pathways
cib01240
Biosynthesis of cofactors
cib04122
Sulfur relay system
Module
cib_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HF677_017815 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HF677_017815 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cib03016
]
HF677_017815 (thiI)
Enzymes [BR:
cib01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
HF677_017815 (thiI)
Transfer RNA biogenesis [BR:
cib03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
HF677_017815 (thiI)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Diphthami_syn_2
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
QKE21427
LinkDB
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Position
complement(3708632..3710080)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDEDLAVVRHWDHVEVRAKDESQR
LDIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHEFS
SIEVERYVGGGLNQHIESARVKLTKPDVTVNLEIENDRLLLVKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISHDKEHIINLAREIGTEDFARTMPEYCGVISKSPTVKAIKAKI
EAEEENFDFSILDKVVEEANNIDIRDIAQQTQQTVVEVETVSGFGPNDVILDIRSVDEQD
DKPLKVDGVDVVSLPFYKLSTKFGDLDQSKTWLLWCERGVMSRLQALYLREQGFENVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccagaaatcaccatcaaaagccaatctgtgcgtttg
cgctttataaaaattctgacagggaacattcgtaacgttttaaagcactatgatgaagac
cttgccgttgtccgccactgggatcacgttgaggttcgcgctaaagatgaaagccagcgc
ctggatattcgcgacgcgctgacccgtattccggggatccaccatattctcgaagttgaa
gacgtgccgtttaccgatatgcacgatattttcgagaaagcgctggtgcagtatcgcgat
caactggaaggcaaaaccttctgcgtacgcgttaagcgtcgcggtaagcatgagtttagc
tctattgaggtggaacgctatgttggcggtggactgaaccagcatattgaatccgcgcgc
gtgaagctgacgaagccggacgtgacggttaatcttgaaatcgaaaacgaccgtctgctg
ctggttaaaggccgctatgaaggtattggcggtttcccgatcgggacgcaagaagatgta
ctgtcgctgatttccggtggtttcgactccggcgtgtccagttatatgctgatgcgtcgc
ggctgccgtgtgcactactgcttctttaatctcggcggcgcagcgcatgaaatcggcgtt
cgtcaggtggcgcattatctgtggaaccgctttggtagctcgcatcgcgtgcgttttgtc
gcgatcaactttgagccggtggttggcgagatcctggagaaagtcgacgacggtcagatg
ggcgtggtccttaaacgtatgatggttcgtgcagcgtcgaaagtcgctgagcgctacggc
gtacaggcgctggtaaccggtgaagcgctgggccaggtgtccagccagacgctgaccaac
ctgcgcctgatcgataacgtttctgacaccctgatcctgcgcccgcttatctcccatgat
aaggagcacatcattaatctggcgcgtgaaattggtactgaggactttgcccgtaccatg
ccggaatactgcggtgtgatttcaaaaagcccgacggtgaaagcgattaaagcgaagatt
gaggccgaagaagaaaacttcgatttctctatcctcgataaagtggttgaagaagcgaac
aatatcgatattcgtgatatcgcccagcagacgcagcagaccgtggtggaagtggaaacc
gtgagcggcttcggcccgaacgatgtgattctggatatccgctctgtggatgaacaggat
gacaaaccgctgaaagttgacggtgtggacgtcgtttctctgccgttctacaaactgagc
accaaattcggcgatctggaccagagtaaaacctggctgctgtggtgtgaacgcggggtg
atgagccgtctgcaggcgctgtatctgcgcgagcagggctttgaaaacgtgaaggtatat
cgcccataa
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