Citrus x clementina (clementine): CICLE_v10023712mg
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Entry
CICLE_v10023712mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00040
Pentose and glucuronate interconversions
cic01100
Metabolic pathways
Module
cic_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CICLE_v10023712mg
Enzymes [BR:
cic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
CICLE_v10023712mg
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
18047698
NCBI-ProteinID:
XP_006444403
UniProt:
V4TBI3
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All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MARQERFVVKAVLLLGLTFLSSVVQGAEPNYSLYFDVTKFGAEANGDKNNAQAFTETWAK
ACGSGAPAKVLIPSGTFLTGPVVFSGPCKSAITVEVRGIVKATTDLKEYADGDWILFENI
DGLLLTGGGTFDGQGAASWKLKDSNPQHSATKCDLLPISIKFNHVNNSVVTGINSLNSKG
FHILLVFCQNFTASNLNITAPDESPNTDGIHLSLSSFVNITNSKIGTGDDCVSIGHGSTD
ISVSRITCGPGHGISVGSLGNKPDEMDVNGITVFNCTLINTTNGLRIKTKRGSASLKASR
IFYDNIIMDKVKNPIIIDQNYGAKKNEPSRVKITDVHYKNIKGTSITNVGVNLNCSSVVP
CDGVELVGVDLAFDVGSAKKAEANLPFSSSCANAEAKFEGKISPPPC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacaagagagatttgttgtcaaggctgttcttctcctaggattaacttttctc
tcttctgtggtgcaaggggcagaacccaactatagcttatattttgatgttacaaaattt
ggtgctgaggcaaatggcgacaaaaataatgcacaggcatttactgagacttgggcaaag
gcatgcggatctggtgctccagcaaaggttcttataccctcaggaacatttctgacaggg
ccagtagttttttcagggccatgcaaaagcgctataactgttgaagttcggggcattgta
aaagccacaactgacctcaaggaatacgctgatggagactggatcctgtttgaaaacata
gatggtttgcttctcactggtggaggtacttttgatggccaaggtgccgcttcatggaaa
ttaaaagactctaatccccagcactctgctactaagtgtgaccttctcccaatttcaatc
aaattcaaccatgtgaacaattccgttgttactgggatcaattccctcaacagcaaaggc
ttccacatcctcctcgtcttctgccaaaacttcacggccagtaacctcaacatcactgct
ccggatgaaagccctaacactgacggtatccatttaagcttgtccagttttgttaacatc
accaacagcaagattggaaccggcgatgattgtgtttccattggacatggttccacggat
atttccgtctcccgaatcacttgtggtcctggacatggcatcagcgttggcagccttgga
aacaaaccggacgagatggatgtgaatgggatcactgtgttcaattgtacactaattaac
accacaaatggcctgagaattaagacaaagcggggatcagcttctcttaaagcttctcgc
atcttttatgacaatattatcatggacaaggttaagaatcccattatcatagaccaaaac
tatggtgccaaaaagaatgagccatcgcgcgtgaagatcaccgatgttcattacaagaac
attaagggaacctcaattacaaatgtaggtgttaatctaaattgcagttcagtggttcct
tgtgatggtgttgaattggttggcgtggatttggcctttgacgtcggctccgccaagaaa
gctgaagctaatttgccgttctcatcttcatgtgcaaacgctgaagccaagtttgagggc
aagatcagcccaccaccctgctag
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