Citrus x clementina (clementine): CICLE_v10024990mg
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Entry
CICLE_v10024990mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00052
Galactose metabolism
cic00511
Other glycan degradation
cic00531
Glycosaminoglycan degradation
cic00600
Sphingolipid metabolism
cic00604
Glycosphingolipid biosynthesis - ganglio series
cic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
CICLE_v10024990mg
09103 Lipid metabolism
00600 Sphingolipid metabolism
CICLE_v10024990mg
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
CICLE_v10024990mg
00604 Glycosphingolipid biosynthesis - ganglio series
CICLE_v10024990mg
00511 Other glycan degradation
CICLE_v10024990mg
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cic04147
]
CICLE_v10024990mg
Enzymes [BR:
cic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
CICLE_v10024990mg
Exosome [BR:
cic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CICLE_v10024990mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
18036862
NCBI-ProteinID:
XP_006426555
UniProt:
V4SLQ4
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MHSERESESDGTTSTATTRGPRESTTTMTVKRAMATMRRRSTATTNTTLFLTVLISLLAF
LGFVPVFAPLPSLAFRNPPPPPHHRHRHNNVNGRKFEIEDDMFRKDGEPFQIIGGDLHYF
RILPQHWEDRLLRAKALGLNTIQTYVPWNLHEPKPGKLVFSGIADLVSFLKLCQKLDLLV
MLRPGPYICAEWDLGGFPAWLLAKKPALKLRSSDRAYLQLVERWWGVLLPKIAPLLYDIG
GPIVMVQIENEFGSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLMKGTNRGDAV
FAAVDFSTGDEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLE
KILSQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFK
AIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLNMLDPADVVESENPLSMES
VGQMFGFLLYVSEFGGKDYGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSNRA
LSLPNFRCGSNISLFVLVENMGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNL
NEVPKISPILEVAYSGLIKASARKKLEHNAGNITKEPAFYVGRFSIDKVNQVKDTYLSFS
GWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILHHGENLVVIFELESPNSELVIHSVNQ
PDFTCGSIKSNVLQL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtgagagagagagtgagagtgacggcactactagtacagctacaacgagaggc
ccaagagagtcaacgacgacgatgacagtcaaacgcgcgatggcgacaatgcgaaggcgg
agcaccgccaccaccaatacgacgttgttcctcaccgttttgatatcgctcttggccttt
cttggcttcgtccctgtcttcgctcccctcccttctctcgccttccgcaatcctcctcct
cctcctcaccaccgtcatcgccacaataacgtgaatggtcgaaagtttgagattgaggat
gacatgttccggaaagatggtgagccatttcagattattggtggtgacctgcattatttc
cgcattctccctcagcactgggaagataggcttttgcgagcaaaggctttaggcttgaat
accattcaaacttatgttccttggaatctgcatgaaccaaaacctggcaagctggttttt
agtggcattgcagatcttgtttcatttcttaaactttgtcagaagctggatttgcttgtt
atgcttcgacctgggccttatatatgtgcagagtgggatttggggggtttccctgcttgg
ttacttgccaaaaagccggctctcaagctaaggtcatctgatcgtgcttaccttcagttg
gttgaaagatggtggggagtcctacttccgaaaatagctcctctgctttatgacattgga
ggcccaattgtaatggttcagattgaaaatgaatttggttcgtatggagatgacaaagag
tatcttcatcaccttgtaacattggcgagagcacaccttgggaaagatataattttgtat
actacagatggaggtacaagggaaactcttatgaaaggaaccaaccgtggagacgctgtc
tttgcagctgttgacttctcaacgggtgatgagccatggcctatatttaagttacaaaag
cagttcaatgcaccaggaaagtcaccaccgctttcttcggaattttatacaggctggctt
acacactggggagagaagattgcgaagacggatgctgattttaccgcatcttatctagag
aagattttgtcacaaaatggttctgctgtgctttatatggcacatggtgggacaaacttt
ggattttacaacggagcaaatactggtaacactgagtctgattaccagccagatctcact
tcctatgattatgatgcaccaattaaggaatccggtgatgttgataacccaaagttcaaa
gcaatcaggagggtggtagagaaatttagtccagcatctcttccttctgttcttcctgat
aatgagaaggcaggatttggacctattcagttacagaaaacagcattgttatttgactta
ctcaacatgctagatcctgcagatgtagttgaatctgaaaacccactttcaatggagtct
gtgggtcagatgtttggatttctattgtatgtttctgaatttggtggaaaggactatgga
agcagtcttcttatatcaaaggtccatgacagagctcaagtgtttatatcatgtccaact
gaagataatagtggaaggccaacatatgttggaaccattgaacgatggtcaaatcgagca
ctcagcctccctaattttagatgtggctccaacatcagcttatttgttttggttgaaaac
atgggccgtgtaaactatgggccatatatgtttgatgagaagggcatcttgtcttcagtt
tacttgggtgggaaagttctgcgcggttggaaaatgattcctgttccttttcacaacctg
aatgaggtgccaaaaatcagtcccatccttgaggttgcatattctggactgattaaagca
tctgcccgcaaaaaattagaacataatgctgggaatattacaaaagaacctgcattctat
gttgggcgcttttctattgacaaagtaaaccaagttaaagatacatacttatcgttcagc
gggtggggtaaagggattgcatttgttaacgaattcaacttgggaagattttggccgtct
tttggacctcaatgcgacctttatgtccctgctccaatccttcatcatggggaaaatctt
gtggtcatatttgagctggaatctccaaactcggagcttgtaattcattcagtaaatcaa
ccagacttcacgtgtggttcaattaaatcaaatgtgcttcagctttaa
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