Ctenopharyngodon idella (grass carp): 127497961
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Entry
127497961 CDS
T08802
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cide03016
]
127497961
Enzymes [BR:
cide01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
127497961
Transfer RNA biogenesis [BR:
cide03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
127497961
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
127497961
NCBI-ProteinID:
XP_051722774
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Position
16:complement(7348196..7743911)
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AA seq
563 aa
AA seq
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MPSACDSFVDDIEDMVTSYDPTPHERQFARRNIVPHARKNKQQPAGEELQTDSVIPGTQK
IWVRTWGCSHNSSDGEYMAGQLAASGYKITENPSDADLWLLNSCTVKNPAEDHFRNSIKK
AQEQNKKVVLAGCVPQAQPRMDYLKDLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKEK
GKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPSLLWELVKEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCCADFRRVMDFLKEKVPGITIATDIICG
FPGETDEDFEQTMELVRQYRFPSLFINQFYPRPGTPAARMEQIPAHLKKQRTKDLSALFH
SYNPYDHKIGQRQRVLVTEESFDSQYYVAHNKFYEQVLVPKKPEFKGKMIEVDIYEAGKH
YMKGRPAEDAQVFTASIAQPLQKGQVSGLPQDLKKAHQNDIRSSAASSALMGWSWRFDGD
GLKLLSLGFALAAIIMIFVIELH
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctgcttgtgactcttttgttgatgatatcgaggatatggtgacttcctatgac
cccactccccatgagcggcagtttgcaaggagaaacattgtgcctcatgcacgcaagaac
aagcaacagcctgcaggagaagagcttcagacagacagcgtgattcctggcacacagaag
atctgggtaaggacgtggggctgctctcacaacagctctgatggtgaatacatggcgggg
cagttggctgccagcggctataagataacagagaatccatctgatgctgatctatggtta
ctgaacagttgcacagtcaaaaaccctgcagaagatcacttcaggaactccataaagaaa
gctcaggagcagaataagaaggttgttttagcgggatgtgtgccgcaggcccagcccagg
atggactacctaaaagacctgagcatcattggggttcagcagattgatagagtggtggag
gttgtggacgaggctgtcaaaggtcactctgttcgtctgctgggtcagaagaaggagaaa
gggaaacgactgggaggagcgcggctggatttgcccaagatcaggaagaaccctctgatt
gaaataatttccatcaatacaggctgtctgaatgcttgcacgtactgcaaaaccaaacac
gccagaggggatctggccagttaccccatagaggagctggtggagagagccagacagtcg
ttccaggagggtgtctgtgagatctggctgaccagtgaggacacgggtgcgtacggccgg
gacatcggcactgacctgccgtctctgctctgggaactggtgaaggagatcccggaggga
gcgatgttgcgcctgggcatgaccaacccaccgtacatcttggaacatctggaggaaatg
gccaaaatcctcaaccacccgagagtctacgccttcctccatgtgcctgtccaatcagca
tccgacagtgtcctgatggacatgaagagagagtactgctgtgccgacttcagacgggtc
atggacttcctcaaggagaaggttccaggcatcactattgccacagacatcatctgtggc
ttcccaggtgagacggatgaggactttgagcagacaatggaacttgtgaggcagtaccgc
tttcccagcctctttatcaaccagttctacccacgacctggaactccagcggccaggatg
gagcagattccagcacacttgaaaaaacaaagaaccaaagatctctctgctctcttccac
tcttacaacccttatgaccacaagatcgggcagaggcagcgtgtgctggtcactgaggag
tcctttgattcccagtactatgtcgcccacaacaagttctatgagcaggtgctggtgccc
aagaagcctgagttcaaagggaagatgatcgaggtggatatatacgaggctgggaagcac
tacatgaaggggcggccagcggaggatgctcaggtctttactgcctctatcgctcagcct
cttcagaagggccaggtgtctggactccctcaggacctaaagaaggcccatcagaatgac
atccgttcctctgcagcgtcctctgcgctcatgggatggtcatggagatttgacggcgat
ggactcaagctgctctctttgggatttgctctggcggccataatcatgatttttgtgatt
gagctgcactga
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