Ctenopharyngodon idella (grass carp): 127501900
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Entry
127501900 CDS
T08802
Name
(RefSeq) estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127501900
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cide03310
]
127501900
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
127501900
Nuclear receptors [BR:
cide03310
]
3. Estrogen like
3A. Estrogen receptor
127501900
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Oest_recep
SLS1_C
Motif
Other DBs
NCBI-GeneID:
127501900
NCBI-ProteinID:
XP_051730165
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Position
20:complement(17826453..17846678)
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AA seq
608 aa
AA seq
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MVMSEGQTSKEAAGARQRRRTSPNPEREHLEGLSSPPTAHKLSPMYPKEEHSVGAISSSV
NYIDGAYEYPDPTQTYGTSSPASVGYYLAPTDPHAPPVEEHLQTLGAGSSSPLMFTPSSP
QLSPCLSHHGGHHSTHQVSYYLDTSSSTVYRSGVVSSQQPSVGLCEVLCSATDRQELYTG
SRAAGGFDSGKETRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYVCPATNQCTI
DRNRRKSCQACRLRKCYEVGMMKGGIRKDRGGRAIRRERRRSSNEARDKSYNEQSSRAAL
RTATPQDKRKKSSSGVASAILMPPDQVLVLLLGAEPPAVCSRQKHSRPYTEITMMSLLTN
MADKELVHMIAWAKKVPGFQDLSLHDQVQLLESSWLEVLMIGLIWRSIHSPGKLIFAQDL
ILDRSEGECVEGMAEIFDMLLATVARFRSLKLKLEEFVCLKAIILLNSGAFSFCSSPVEP
LMDSFMVQCMLDNITDALIYCISKSGASLQLQSRRQAQLLLLLSHIRHMSNKGMEHLYHM
KCKNRVPLYDLLLEMLDAQRFQSPGKLQQLWEQSEKDPPSTPTTSSSSSPSRGPGAMQPN
TACLSPDP
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgtctgaagggcagaccagcaaagaggctgctggtgccaggcagcgacgcagg
accagcccaaacccggagagagaacacctagagggactttcctcaccgcccactgctcac
aaactctcacccatgtaccctaaggaggagcacagcgtaggagccatcagctcctctgtc
aactacattgatggagcctatgagtacccagaccccacacagacctacggcacctcatca
cctgcctctgtcggatactacctggctcccacggacccccacgcaccccccgttgaagaa
catctgcagacgttgggcgctggatccagcagccccctcatgtttacaccctccagccct
cagctgtccccgtgcctgagccatcatggaggacaccactccacccaccaggtgtcctac
tacctggacacatcttctagcacagtctacaggtcaggtgtggtatcttctcagcagcca
agtgttggtctgtgtgaagtgttgtgcagtgcgactgacaggcaggagttgtacaccgga
tcaagagctgcaggaggatttgattcagggaaggagacgcgcttctgtgcggtgtgcagt
gactatgcctctggctatcattatggagtctggtcctgcgagggatgcaaagctttcttc
aagagaagcattcaaggtcacaacgactatgtttgtccagcgaccaaccagtgcactatt
gacagaaaccgcaggaagagctgccaagcatgcagactacgcaagtgttatgaagttggc
atgatgaaaggaggtattcgtaaggaccgcggtggccgcgctatcaggcgtgagaggagg
aggagcagtaatgaggctcgtgacaagagctacaatgagcagtcaagccgtgctgcactg
aggacagctacccctcaggacaagaggaagaagagcagcagcggggtggccagcgctata
ttaatgccacctgaccaggtgctggtgttgcttctaggggcagagccgccggctgtctgt
tcacgtcagaagcacagccgcccgtacaccgagatcaccatgatgtccctgctcacaaac
atggctgacaaagaactcgtccacatgatcgcctgggctaagaaagtaccagggttccag
gacctctctctgcatgaccaggttcagttgttggagagctcttggctggaggtgttgatg
atcggcctcatatggaggtccattcattcacctggaaaactcatctttgctcaggatctc
atccttgataggagtgaaggagaatgtgttgagggaatggctgagattttcgacatgctt
ttggcgactgtggctcgattccgcagtctcaaactcaagctggaggaatttgtttgtctt
aaagccatcatacttctcaattctggtgcattttcattctgctccagtccagtggagccc
ctgatggacagcttcatggtgcagtgcatgctggacaacatcactgatgccctcatttac
tgcatcagtaaatcaggtgcctcgctgcagctgcagtcccgccgtcaggcacagctcctg
ctgctgctctcccacatcagacacatgagcaacaaaggaatggagcacttataccatatg
aaatgtaagaatcgagtcccgctatatgatcttttgctggagatgctggatgcccaacga
ttccaatccccaggaaagctgcagcaactatgggaacagagtgagaaagaccccccgtct
acaccaacaaccagcagcagcagcagcccctccagaggacctggagccatgcagcccaac
actgcctgtctcagcccagacccctga
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