Ctenopharyngodon idella (grass carp): 127501943 Help Entry 127501943         CDS       T08802                                  Name (RefSeq) squalene synthase isoform X1   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism cide  Ctenopharyngodon idella (grass carp) Pathway cide00100   Steroid biosynthesis cide01100   Metabolic pathways Module cide_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:cide00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     127501943  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:cide01006]     127501943 Enzymes [BR:cide01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      127501943 Prenyltransferases [BR:cide01006]  Terpene biosynthesis   Squalene/phytoene synthase    127501943 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SQS_PSY Octopine_DH GBP_C Motif Other DBs NCBI-GeneID:  127501943 NCBI-ProteinID:  XP_051730259 LinkDB All DBs Position 20:complement(31683847..31697232) Genome browser AA seq 447 aa AA seqDB search MAGVGGKSAVSFSVLKRSFSLRGSPRSVLTGGRRSAQEGWLVARPPHPLRAHRHPAYVCF SYQDSMSETLRTCYAYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVEDDMTIPL EKKVPLLHDFHTFLYQPEWCFTESREKDRRVLEDFPTISVEFRNLGQEYQDVISDICHRM GVGMAEFLEKKVASMKEWDKYCHYVAGLVGIGLSRLFSASQLEDVEVGRDTELANSMGLF LQKTNIIRDYLEDQQQGRAFWPQEAWSQFASRLEDLAQPQHLSSALSCLNLLVTDALRHV PDVIAYLSRLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQAVTLMMQATN MGAVQSIIAQYSQEILQKVSVTDPSQEKTLCILNLICEKSLSGAALSSRAHHISPMYVSA AMLLAALSWQYLNATAGPPGGADMQGH NT seq 1344 nt NT seq  +upstreamnt  +downstreamnt atggctggagttggcggaaagagcgcagtgtcgttctccgtgctcaagcgctcgttctcg ctgcgcggctccccgcggtcggtgctcactggcgggcggcgcagcgcgcaggaagggtgg ctggtggcccgtcctcctcacccgctcagagctcaccgacaccccgcgtatgtgtgtttc tcctaccaggactccatgagcgaaaccctgcggacctgctacgcgtatctgaaccagacc agccggagcttcgcggcggtgattcaggccctggatggagaactgcggcatgccgtgtgt attttctatctggttctgcgagccctggacaccgtagaagacgacatgaccatcccgctg gagaagaaggtcccgctgctgcacgacttccacacgttcctgtatcagcccgagtggtgc ttcacagagagcagagagaaagaccgacgggtcctggaggatttccctacgatttcagtg gagttcaggaacttgggccaagagtatcaggacgtcatttcagacatctgtcaccggatg ggtgtaggaatggctgaattcctggagaagaaagttgcttcaatgaaggagtgggacaaa tactgtcattatgtggcgggtctggtggggatcggactgtcccgactcttctctgcgtcc cagctggaggatgttgaggtgggccgggacacggagctggccaactccatgggtctgttc ctccagaagaccaacatcatcagggactatctggaggaccagcagcagggacgggccttc tggccgcaggaggcctggagtcagttcgcgtcccgtctggaggatttggcccagcctcag cacctgagctccgccctgtcctgtctcaacctgctggtgaccgacgccctccgccacgtc cctgatgtcatcgcatacctgtcccgcctccgcaaccagagcgtcttcaacttctgtgcc attccacaggtgatggcgatagcgactctgtctgcgtgctacaacaatcctcaggtgttt cagggtgtggtgaagatccggaagggtcaggcggtgacgctcatgatgcaggccacaaac atgggcgccgttcagagcatcatcgctcagtacagtcaggagatcctgcagaaagtttcc gtcacggatccgtcccaggaaaagactctgtgtatcctgaatctcatctgtgagaagagc ctgtctggagcggcgctgtcgtcccgagcgcaccacatctctccgatgtacgtttcggcg gccatgctgctggcggccctcagctggcagtaccttaatgccacggcggggccaccaggg ggcgcagacatgcagggacactga

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