Ctenopharyngodon idella (grass carp): 127503610
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Entry
127503610 CDS
T08802
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127503610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
NOD
Ank_3
Ank_5
Ank_4
EGF_3
cEGF
Gram_pos_anchor
Motif
Other DBs
NCBI-GeneID:
127503610
NCBI-ProteinID:
XP_051733579
LinkDB
All DBs
Position
21:complement(3496851..3531902)
Genome browser
AA seq
2446 aa
AA seq
DB search
MNRFLVKLTLLTAASLATVAQGQRCSEYCQNGGICELKPSGEASCRCPADFVGPQCQFAN
PCSPSPCRNGGVCLARTQGNDVEVTCECVLGYSDPLCLTPVNHVCMSSPCRNGGTCSLLT
LDTFTCRCPPGWSGKTCQQADPCASNPCANSGQCSAFDSHYICTCPPNFHGQTCRQDVNE
CALSPSPCRNGGTCINEVGSYFCRCPPEYAGTHCERLYHPCHPSPCRNGGTCLQTSDTTY
ACTCLSGFTGQTCEHNVDDCTQHACENGGRCIDGVNTYNCHCDKHWTGQYCTDDVDECEL
SPNACQNGGTCHNTIGGFHCVCVNGWTGDDCSENIDDCASAACSQGATCHDRVASFFCEC
PHGRTGLLCHLDDACISNPCQKGSNCDTNPVSGKAICTCPPGYTGSACNQDIDECSLGAN
PCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECKSNPCQNDATCLDQIGGFHCICMPG
YEGVFCQINADDCASQPCLNNGKCIDKINSFHCDCPKGFSGNLCQVDVDECASTPCKNGA
KCTDGPNKYTCECTPGFAGAHCELDINECVSSPCHYGVCRDGVAAFTCDCRPGYTGRLCE
TNINECLSQPCRNGGTCQDRENSYTCTCPKGTTGVNCEINIDDCKSKPCDYGKCIDKING
YECVCEPGYTGSMCNINIDDCALNPCHNGGTCIDGVNTFTCLCPEGFRDATCLSQHSECS
SNPCIHGNCVDQINSYTCMCEAGWMGRNCDININECLSNPCVNGGTCKDMTSGYVCTCRA
GFSGPNCQTNINECASNPCLNQGSCIDDVAGFKCNCMLPYTGEVCENVLAPCVQRPCKNG
GVCRESEDFLSFSCACPAGWQGQTCEVDINECVRNPCTNGGVCENLRGGYQCRCNPGFTG
DLCENDVDDCEPNPCSNGGVCQDRVNGFMCVCLAGFRGERCAEDIDECVSAPCRNGGNCT
DCVNSYTCSCPVGFSGINCEINTPDCTESSCFNGGTCVDGINSFSCVCLPGFTGNYCQHD
VNECDSRPCQNGGTCQDGYGTYKCTCPHGYTGLNCQSLVRWCDSSPCKNGGSCWQQGASF
TCQCASGWTGIYCDVPSVSCEVAAKQQGVSVVVLCRNAGQCVDAGNTHLCRCQAGYTGSY
CQEQVDECMPNPCQNGATCTDYLGGYSCECVPGYHGVNCSKEINECLSQPCQNGGTCIDL
INTYKCSCPRGTQGVHCEIDVDDCSPAVDPLTGEPRCFNGGRCVDRVGGYGCVCLPGFVG
ERCEGDVNECLSDPCDPIGSYNCVQLINVFRCECRTGYTGKRCETVFNGCKDTPCKNGGT
CAVASNTKHGYICKCQPGYSGSSCEYDAQSCGSLRCRNGATCVSGHLSPRCLCPPGFSGH
ECQTRMDSPCLTNPCYNGGTCQPINDAPFYRCSCPANFNGLLCHILDYSFNGGQGRDIAP
PPEVEIRCEIAQCEGRGGNAICDTQCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYFN
DGKCDEQCANAGCLYDGFDCQRLEGQCNPLYDQYCRDHYADGHCDQGCNNAECEWDGLDC
ADDVPQKLAVGSLVLVVHIPPDDLRNRSSSFLRELSGLLHTNVVFRRDANGEPLIFPYYG
NEHELSKHKRSDWTDPAQLLQRARRSLTSFMKSRLRRELDQMEIKGSIVYLEIDNRQCYQ
QSDECFQSATDVAAFLGALASSGNLNVPYIIEAVTSEDAPSKTGEMYPLFLVLLALAVLA
LAAVGVVVSRKRKREHGQLWFPEGFKVTEPKKKRREPVGEDSVGLKPLKHSDSSLMDEQL
SEWAEDDTAKRFRFEVQSILDMSGQLDHRQWTQQHLDAADLRLNSMAPTPPQGEIENDCM
DVNVRGPDGFTPLMIASCSGGGVENENGEAEDDPSADVITDFIYHGANLHNQTDRTGETA
LHLAARYARSDAAKRLLESCADANVQDNMGRTPLHAAVAADAQGVFQILIRNRATDLDAR
MHDGTTPLILATRLAVEGMVEELINCHADPNAIDDSGKSALHWAAAVNNVDAAVVLLKNG
ANKDLQNNKEETPLFLAAREGSYETAKVLLDHLANRDIADHLDQLPRDIAQERMHHDIVR
LLEEYNLVRSPPLPLSPPLCSPNTYLGIKPSPGSANNNAAKKARKPGGKGVGGGKDGGKD
MRMKKKKSGEGKNGGMMEVGVLSPVDSLESPHGYLSDVSSPPMMTSPFQQSPPITLNQLQ
GLADSHMSGALQSLGKPFDSAPPRLSHMPVANNGAQTAACDWLQRVQQQQQQAGFTQLIP
TMLPATSMPQVMGYPTMQTSHLSAASHMIPSHAHQNMPPMQHQNNASSGHALSHHFLGDL
SGLDLQSGSGHAPIQTILPQESQRMAPPISSTQFLTPPSQHSYSNPMDNTPSHQPQVPDH
PFLTPSPGSPDQWSSSSPHSNLSDWSEGISSPPTSMQMNHIPEAFK
NT seq
7341 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtttcttggtgaaattaacgctactgacggcagcatcgctcgcgacggtggca
caagggcaaagatgctcagaatactgtcagaatggaggaatatgcgagctcaagccgagt
ggagaagcatcatgcaggtgtcctgcagacttcgtcggcccccagtgtcagttcgcgaac
ccgtgcagcccgtcgccgtgtcgtaacggaggtgtttgcctcgcacggacgcaggggaat
gacgtggaggtgacctgcgaatgcgtcttaggatacagcgatccgctctgtctgacaccc
gtcaatcatgtgtgtatgagctccccatgccgtaacggaggcacctgctctctgctcacg
ctcgacacctttacctgccgctgcccacctggatggtcaggtaaaacgtgccaacaggcc
gacccgtgtgcgtcgaacccctgtgccaacagcggccagtgttcagcattcgactcgcac
tacatctgcacctgccctcctaacttccacggtcagacgtgtcggcaagacgtgaacgag
tgcgcactctctccctccccctgtcgtaacggaggcacctgtataaacgaggtgggctcg
tacttctgccggtgcccacctgagtacgctggcacacactgtgagcgcctgtaccacccg
tgccacccctcgccctgcaggaatggagggacctgcttacagaccagcgacaccacctat
gcctgcacttgtctgtcagggttcacgggtcaaacgtgcgagcataacgttgacgactgc
acccagcatgcctgtgagaatggaggcaggtgtatagacggcgtcaatacgtacaactgc
cattgcgacaaacactggaccggtcagtactgtacggatgatgtagatgagtgcgaactc
tcgcctaacgcttgtcagaatggaggaacgtgtcacaacaccatcggcgggttccactgt
gtgtgcgtgaacggatggacgggcgatgactgcagcgagaacatcgacgactgcgccagc
gctgcgtgttcccagggtgccacctgccatgatcgagtcgcctctttcttctgcgagtgt
ccacatggccgcacaggtcttctgtgtcacctcgacgacgcctgcatcagtaatccatgt
cagaagggctcaaactgcgacacgaacccggtgagcggaaaagccatctgcacctgtccg
cccgggtacacgggatcggcctgcaaccaagacattgacgagtgctcgctcggtgcaaac
ccatgcgagcatggcggacggtgtctcaacactaaaggctccttccagtgcaagtgtctc
cagggttatgaaggtccacgttgcgaaatggacgttaatgaatgcaagtcaaacccctgc
cagaatgacgccacctgcctcgaccaaattggtggattccactgcatctgcatgccaggt
tatgagggtgtgttttgtcaaataaacgctgacgattgtgcatctcagccttgcctcaac
aacggaaaatgcatcgacaagatcaactcgttccactgcgactgccccaaagggttctct
gggaatttatgtcaggtggatgtggatgagtgcgcaagcacaccatgtaaaaacggagct
aagtgcacagacggaccgaacaaatacacctgcgaatgcactccaggttttgctggcgct
cactgcgagttggacatcaacgagtgtgtgtcaagcccttgtcattacggcgtgtgtagg
gatggcgtggccgctttcacctgtgattgtcgccctggatacaccggacgcctgtgtgag
accaacataaacgagtgcttgagccaaccgtgccgaaacggaggcacctgtcaggacaga
gagaactcgtacacctgtacctgccctaaaggaaccacaggtgtgaactgcgagataaac
attgacgactgcaagagtaaaccatgtgactatggaaagtgcatcgacaagatcaacggc
tacgagtgtgtgtgtgaacccggatacacaggctcaatgtgtaacatcaacattgacgac
tgcgcgttaaacccctgtcataatggcggcacctgcatcgacggggtcaacaccttcacc
tgcctctgtccggagggtttccgtgacgccacctgcctgtctcagcacagcgagtgttcc
agcaacccctgtatccacggcaactgcgtggaccagatcaacagctacacatgcatgtgc
gaggccggctggatgggacgcaactgtgacatcaacatcaacgagtgtttgtccaatccg
tgcgtgaacggaggcacctgtaaggacatgaccagcggctacgtgtgcacctgcagagct
ggcttcagcggtcccaactgccagacgaacattaacgagtgcgcatccaacccctgccta
aaccagggctcctgcatcgacgatgtggccggattcaagtgcaactgcatgttgccttac
acaggcgaggtgtgtgagaacgttttggctccctgtgtgcagcgtccttgtaagaacgga
ggtgtgtgtcgtgaatcggaggattttcttagtttctcttgtgcttgtcctgctggatgg
caaggtcagacgtgtgaggtggacattaacgagtgtgtgaggaatccttgcactaacgga
ggggtgtgtgagaacctgcgcggtggataccagtgccgctgcaaccccggattcaccgga
gatctgtgcgagaacgacgttgacgactgcgagccaaatccgtgcagtaacggcggtgtg
tgccaggaccgtgtgaatggctttatgtgtgtgtgtttggctggtttccgtggggagcgc
tgtgcagaggacatagacgagtgcgtgagcgccccctgccgtaacggagggaactgcacc
gactgtgtcaacagctacacctgcagctgtcctgtaggattcagtggcatcaactgtgag
atcaacacaccggactgcactgagagctcgtgttttaatgggggaacgtgtgtggatggc
ataaactcgttttcatgcgtgtgtttgccgggatttaccgggaattactgccagcatgat
gttaacgagtgcgactcgcggccgtgccaaaacgggggcacctgtcaggacggatacggc
acctacaaatgcacttgcccacacggatacaccggactcaactgccagagtctggtgcgc
tggtgtgactcctctccctgtaagaacggtggctcgtgttggcagcagggggcgtctttt
acctgccagtgtgccagtggttggacgggcatctactgtgacgtccccagtgtcagctgt
gaggtcgccgccaagcagcaaggagtgtcagtggtcgttctgtgtcgtaatgcgggtcag
tgtgttgatgctggtaacacacacctgtgtagatgtcaagccggatacacgggcagctac
tgtcaggagcaggtggatgagtgcatgccgaacccctgccagaatggagccacctgcacc
gattacctgggaggatacagctgcgagtgtgttcctggatatcacggggtcaactgcagc
aaggagataaacgagtgtctgtctcaaccctgtcagaacggaggaacctgcatcgacctc
ataaacacatacaaatgttcctgcccacggggaacgcaaggtgttcactgtgagattgac
gtcgatgactgttccccggccgtggatccgttaaccggcgagccgcggtgctttaacggc
ggccgctgcgtggaccgtgtaggcggttatggttgcgtgtgtctgcctggttttgtaggt
gagcgctgtgaaggcgatgtcaatgagtgcctgtctgacccctgtgaccccattggatcc
tacaactgtgtacaactcatcaacgtcttccgatgcgagtgccgaacaggatacaccggc
aagcgctgtgaaactgtgttcaacggttgcaaggacacgccatgcaaaaatggaggaaca
tgtgctgtcgccagcaacaccaaacacggatacatctgcaagtgtcagccgggttattct
ggctcctcctgcgaatacgacgctcagtcctgtggctccctgcgctgtcgcaacggtgct
acctgcgtctccggccacttgagtccccgctgtctctgtccgccgggcttcagcgggcat
gagtgccaaacacggatggactcgccgtgcctcaccaacccctgctacaatgggggcact
tgccagccgatcaacgatgctccgttctaccgctgttcctgccccgccaacttcaacgga
ctcctttgccacatccttgactactccttcaatggggggcagggccgggacatcgcccca
ccaccggaggtggagattagatgtgaaatcgctcagtgtgaaggcaggggtggaaatgcc
atctgcgatacgcagtgtaacaatcacgcgtgcggatgggacggcggagactgctctctg
aatttcgacgacccgtggcagaactgtagcgccgccctgcagtgttggaggtacttcaac
gacggaaaatgtgacgagcagtgcgccaacgctggctgcttatatgatggattcgactgc
caaagactggaggggcaatgcaatccactgtacgatcagtactgtagggatcactatgcg
gatggtcactgcgatcagggctgtaataacgcggagtgcgaatgggatggtctcgactgt
gccgatgacgttcctcagaaactcgccgtgggaagtctggtactagtggtccacatccca
cccgatgatcttcgcaaccgttcctcgtctttcctccgcgagctgagcggactgctgcat
acgaacgtggtgttccgccgcgatgctaacggagagccactcattttcccatactacggc
aacgagcacgagctgagtaaacacaaacgctctgattggaccgaccccgcccagctgctg
cagcgagccaggaggagcctgacgtcatttatgaagtcccgcctacgacgagagctggat
caaatggagatcaaagggtctatcgtctatctcgaaattgacaaccgtcagtgttatcag
cagtctgacgagtgtttccagagcgcgacagatgtggcagcattcctcggagcgctggcc
tctagcgggaatctcaatgttccttacatcatcgaggccgtcacaagtgaggatgcgcct
tcaaagaccggggagatgtaccccttgttcctggtgcttcttgctctggctgttttggcc
ctggcggcagtgggcgttgtggtctccaggaagaggaagagggaacacgggcagctttgg
ttcccagagggatttaaagtcaccgaacccaaaaagaagcgaagggaaccggtcggagag
gactctgtcggactcaagcctctgaaacactctgacagctctctgatggatgaacaattg
agcgaatgggcagaagacgacaccgctaaacgattccggtttgaggtgcagtccattctg
gacatgtccggtcagctggatcaccgtcagtggacgcagcagcacctggacgccgctgac
ctgcgtttgaactctatggctccgacgccaccgcagggagagatcgagaacgactgcatg
gatgtcaatgtccgcgggcccgacggtttcactccactgatgattgcgtcgtgcagtggt
ggcggtgttgagaatgaaaacggcgaggcagaagacgatccgtccgccgatgtcatcacg
gacttcatctaccacggtgccaacctgcacaatcagacggaccggacgggcgagaccgcc
ctgcacctggctgcccgctacgcccgctcggacgcggccaaacgcctgctggagtcatgc
gccgatgctaatgtccaggataacatgggccgcacgcctctccatgctgccgtcgctgct
gatgcacagggtgttttccagattctcattcggaaccgagcgacggatctggacgcccgc
atgcatgacggaacaactccgctgatcctggctacccgactggctgtcgagggaatggtg
gaagagctcattaactgccatgcagatccaaatgctattgatgattctggtaagtctgct
cttcactgggcggctgcggttaataacgtggacgctgctgtcgttcttctgaagaatgga
gcgaataaagacctacagaataacaaggaggagacgccactcttcctggccgctcgtgag
ggcagttacgagaccgctaaagtcctgcttgatcacttggccaaccgtgacattgcggat
cacctagaccagcttccacgcgacatcgcgcaggagcgcatgcaccacgacatcgtccgt
ctgttagaagagtacaacctggtccggagtcccccgctgcccttatcgccccctctctgc
tcacccaacacctacctgggcatcaaacccagcccgggcagcgccaacaacaacgcggcc
aagaaggcaaggaaaccgggaggtaaaggcgtgggaggagggaaggatggtggaaaagac
atgagaatgaaaaagaaaaagagcggagagggcaaaaacggagggatgatggaagtgggc
gtcctctcgcctgtcgattcgctggagtcgccccacggttacctgtcagacgtctcctcc
ccacctatgatgacgtcaccctttcaacagtcccctcccatcactttgaatcaactccaa
ggattggctgattctcacatgagcggagctcttcagagtttagggaagccgtttgactcc
gcccctccacgcttatcccatatgccagtggctaacaatggagctcaaacagctgcgtgt
gattggctgcaaagggtgcaacagcaacaacagcaggcaggcttcacacagctgataccc
acaatgctccctgccacctctatgccacaggtcatgggctatcctacgatgcaaactagc
cacctcagcgcggcgtcgcacatgattcccagccacgcccaccagaatatgccgcccatg
cagcaccaaaacaacgcctcctccggccacgccctctctcatcacttcctaggtgacctg
agtgggctggatcttcagtctggttctggacacgcccccatccagaccatcctgccgcag
gagagccagcgcatggctcctcccatttctagcacgcagtttctgactccgccttctcaa
catagttattccaaccccatggacaacacgcccagtcaccagccgcaggttcctgatcat
cctttcctcacgccctctcctggctctcctgaccaatggtcaagctcgtctccacattcc
aacttgtctgattggtcagagggcatctcaagcccacccaccagtatgcaaatgaaccat
ataccagaggccttcaagtag
DBGET
integrated database retrieval system
