Ctenopharyngodon idella (grass carp): 127504058
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Entry
127504058 CDS
T08802
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04020
Calcium signaling pathway
cide04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127504058
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127504058
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127504058
Ion channels [BR:
cide04040
]
Ligand-gated channels
Glutamate (ionotropic)
127504058
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
127504058
NCBI-ProteinID:
XP_051734352
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All DBs
Position
21:7431871..7465335
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AA seq
970 aa
AA seq
DB search
MRLLLLAALFSCSCVRGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGREKFKLTAI
SVTHKANAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENQDQLSFDNKRGPKAEKVLQFNQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKTARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHISD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNKQRKIIWPGGETERPRGFQMSTRLKIVT
IHQEPFVYVKPTMLDGTCKEEYTPNGVLIKKVICTGPNETIPGNPSGRPIVPQCCYGFCV
DLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDNKESSGSQAVGAAGTP
SLPSSSVETQDDRKSGRADSDPKKKPSFRSISTTLASSIKRRRSSKDTQFPPTDITGQLN
LSDPSVSTVV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcttcttctagctgcgttattctcctgctcctgcgtgcggggcggctgcgag
cccaagattgtgaacattggggccgtcctgagccagaagagatacgagcaggtgttcaag
gatgcggttacccaggcgaaccaggtgtacggaagggaaaaattcaagttgaccgccatc
tccgtcactcacaaagccaatgcgattcagatggctctttctgtgtgcgaggatcttatt
tccagtcaggtatacgccatcctggtgagccatccaccacagtctaatgaccatctgacg
cccactccggtctcctacaccgcagggttctaccgcatacctgtagtagggctcactacc
aggatgtccatttactcagacaagagcatccatctctcgttcctgcgtacagtgccacca
tattcccaccaggcacatgtgtggtttgacatgatgcgggaattccgctggaatcacatc
atccttatcgtcagtgacgaccatgaaggcagagcggcgcagaaaagactagaaactctt
ctggaggagagagagaccaagaataaaaaaaggaactatgaaaaccaagaccaactgtcc
tttgacaacaagagaggacctaaggccgagaaagtgcttcagttcaaccaagagactaac
ttaactgctctgctcctggaggccaaagagctggaggctcgagtgatcattctctctgcc
agtgaggaagatgcagccgccgtgtacaaaacagcgcgcttcctcaacatgacaggctca
ggctatgtatggctggtcggggagcgtgagatgtccggtaaagctttgagcgaagcccct
gatgggctgattggcctccagctcatcaacggcaagaatgagtcggcacacatcagcgat
gccgttgcagtcgtagcccagtccatccaagagctcttcgagaaagagaacatcacagaa
cctccaaggggctgtgtgggaaataccaacatctggaagacagggccactctttaaaagg
gtattgatgtcttctaagtaccctgagggcctaactggacgcgttgagttcaatgacgac
ggtgacagaaaatacgctcattacagcattctcaactaccagaagagcagactgattcaa
gtcggcatttacaatggaacacaagtggtgatgaataaacagaggaagatcatttggcct
ggaggtgaaacagagagaccgagaggattccagatgtctactcgattaaagatagtgacc
attcatcaggaaccctttgtatatgtgaagccaactatgctggatggaacctgcaaggaa
gagtacacgcctaatggagtcttaattaaaaaggtgatctgcactggaccaaatgagacc
atcccaggtaacccatcaggacgcccaattgttccccagtgttgctacggattttgtgtt
gatcttctgatcaaactggcaatgaccatgaacttcacctatgaagtacacttggtggca
gatgggaaatttggaacacaggaaagagtaaataacagtaacaagaaggagtggaacggc
atgatgggtgagctcctgggtggccttgctgatatgatcgttgctcccttgacgatcaac
aatgaacgagcccagtacatagaattctccaagccttttaaataccagggactgactatc
cttgtgaaaaaggaaattcctcgtagtacactggactcgttcatgcagccatttcagagt
acactgtggctactggtgggtctgtcggtacatgtggtggcggtgatgctttacctacta
gaccggttcagcccatttggaaggtttaaagtaaacagcgaagaagaagaagaggatgcc
ctcaccttatcttcagctatgtggttttcctggggcgttttgttgaactctggaatcgga
gaaggtgccccacgtagtttttcagcgagaatcttaggaatggtgtgggctggcttcgct
atgattatagtagcatcttatactgccaacctggctgccttcctggtgttggaccggcct
gaggagcgcatcaccggcatcaatgacccaaggctgaggaacccatcagacaagttcatc
tatgccacagtgaagcagagttcggtggatatttacttccggcgacaagttgagctgagc
accatgtaccgccacatggagaagcacaactacgagagcgccgctgaagccatccaggct
gttcgggacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcc
tcgcagaagtgcgacctggtgaccacgggagagctgtttttccgttcgggctttggcata
ggcatgcgcaaggacagcccctggaaacagaatgtgtccctggctattctcagttcccat
gagaatggcttcatggaggacctagataaaacctgggtgagataccaggagtgtgactca
aggagcaatgccccagccacactcacctttgagaatatggcaggtgtcttcatgctagtt
gctggaggcattgcagcaggcatcttcctcatcttcatcgaaattgcatataagcgccat
aaagacgcccgcaggaagcagatgcagctagcctttgcggccgtcaacgtttggaggaag
aacctacaggacaataaggagagctcagggagtcaagctgtgggtgcggctgggactcca
tctttaccctcttcctctgtagagactcaggatgataggaaaagtggtagagcagacagc
gacccaaaaaagaaaccctcttttaggtccatcagtaccaccctggcctccagcatcaag
agacgtaggtcctccaaagacacgcaattcccacccacagacattacgggccaactcaac
ttgtccgacccgtctgtcagcacggtggtgtga
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