Ctenopharyngodon idella (grass carp): 127505003
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Entry
127505003 CDS
T08802
Name
(RefSeq) beta-1,4-galactosyltransferase 3 isoform X1
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide00510
N-Glycan biosynthesis
cide00513
Various types of N-glycan biosynthesis
cide00514
Other types of O-glycan biosynthesis
cide00515
Mannose type O-glycan biosynthesis
cide00533
Glycosaminoglycan biosynthesis - keratan sulfate
cide00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cide01100
Metabolic pathways
Module
cide_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
cide_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
127505003
00513 Various types of N-glycan biosynthesis
127505003
00515 Mannose type O-glycan biosynthesis
127505003
00514 Other types of O-glycan biosynthesis
127505003
00533 Glycosaminoglycan biosynthesis - keratan sulfate
127505003
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
127505003
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cide01003
]
127505003
Enzymes [BR:
cide01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
127505003
2.4.1.90 N-acetyllactosamine synthase
127505003
Glycosyltransferases [BR:
cide01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
127505003
Glycolipid
127505003
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
127505003
NCBI-ProteinID:
XP_051736182
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All DBs
Position
22:8115611..8130303
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AA seq
411 aa
AA seq
DB search
MVCCGRALDSPCTLALLVGFQFAFVLYFSLGGFRGLVSVLVHSTEPEIDYSRPHDVYTNL
TSLLLHHPGPSGPEQQLRDCTLPSPLLVGPVSVHLSTPPSLEEIKEKNPLVTLGGHYRPP
DCEPRHHTAIVVPYRNRQTHLRALLYHLHPFLQRQQVHYGIYIVHQSGNSTFNRAKLLNV
GVREALKEEDWSCIFLHDVDLLPENDHNTYTCHPQYPTHLSVAMDKFRYRLPYSQYFGGV
SAVTPEQYLKMNGFPNQYWGWGGEDDDIAARVRLSGMKIMRPPLAIGHYKMIKHKGDRGN
EQNPRRFDLLKRTRLNWRSDGLNSLTYELLSKELEPLYTNLSVNIGDDPHHPTLKAPPRK
SHPQPAPTNKTKTEKVGVAITNSTKVEPTHLKASNESSSVVKKAPVNQEVG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgctgcggtcgagcgctggactccccctgcactctggctctgttggtgggcttc
cagtttgcgtttgtcctgtacttctctctgggaggctttcgtggcctagtgtctgttttg
gttcattccaccgagcctgagattgactactctcgaccgcatgacgtctacaccaacctc
acctctctgctgctccaccatccaggacccagtggaccagaacagcagctcagggactgt
acactgccctctccactgctggtgggtcctgtttctgtccacctctccacacccccctcc
ctagaggagataaaagagaagaaccccttggtgaccttagggggtcattaccgcccacca
gactgtgagccacggcaccacacagccatcgtggtcccctaccggaaccgccagacccac
ctccgcgccctcctctaccatctgcacccctttttgcagcgccagcaggtccactacggc
atttacattgtgcaccagtcagggaactccacgtttaaccgagcaaagttgctgaatgtt
ggagtgcgagaggcgctgaaagaggaggactggagctgtattttcctgcatgacgtcgac
ctgctacctgagaatgaccacaatacctacacctgccacccccagtatcctacacacctc
tctgtggctatggacaagttcagatacaggcttccatactctcagtacttcggaggggtg
tctgctgtaactccggagcagtaccttaaaatgaacggctttccgaaccagtattggggc
tggggaggggaggacgatgacatcgcagctcgagtccgtctctctgggatgaagataatg
cgtccccctttggccattggtcattataagatgatcaaacataaaggagatcggggtaat
gagcagaacccgagaaggtttgatttgctgaagcgcacaaggctgaactggcgctcagat
ggactgaactcactgacatatgagctcctgtccaaagagttggagccattgtacaccaat
ttgtctgtcaacattggggatgatccacaccatcccactttgaaggctcctccccggaag
tcacatcctcaacctgctccaactaacaagacaaaaactgaaaaagtgggtgtggccatc
actaattccacgaaagtagagcccacccacttgaaagccagtaatgaaagttcaagtgtt
gttaaaaaagctcctgtgaaccaagaagtaggatga
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