Ctenopharyngodon idella (grass carp): 127519739
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Entry
127519739 CDS
T08802
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2b isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04260
Cardiac muscle contraction
cide04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127519739
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
127519739
04261 Adrenergic signaling in cardiomyocytes
127519739
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127519739
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127519739
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
VWA_CoxE
Cache_3-Cache_2
vWA-TerF-like
Fe_dep_repress
dCache_2
Motif
Other DBs
NCBI-GeneID:
127519739
NCBI-ProteinID:
XP_051763193
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Position
10:5796946..5832328
Genome browser
AA seq
1089 aa
AA seq
DB search
MARWAHACLLLMMVIFSGSWTAVDALTFPQHYTIMHWARRIEQEIDRVLQHISGAQQLKG
IYSEKRRQFSLVRNNPRDIVEKVATDIERLLAKKRKALEKLASEAERLQKDHRWQDGIKE
ENIEYYNSKAEMDYDGEDIDSQMSLKLEFVYDPIFKNHVNFSHTAVQIPTDIYKGAPVIL
NELNWTQALERVFMENSRDDPSLLWQAFGSATGVTRYYPAAPWRAPDKIDLYDVRRRPWY
IQGASSPKDMVILVDVSGSVSGLTLKLIKASVTEMLDTLSDDDYVNVARFNEKAEAVVPC
FKHLVQANVRNKKIFKEAVQQMQAKGTTDYKSGFHFAFNQLLNKTNVPRANCNKIIMLFT
DGGEDRAQDIFEQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGYYFEIRSICAIRI
NTQEYLDVLGRPMVLAGRSAKQVQWTNVYQDALGLGLVVTGTMPVFNLTVDGNSQNQLIL
GVMGVDVHLDELKRLTPQYKLGANGYIFAIDPNGYVLMHPNLQPREEDLPEPVTLDFLDA
EVEDSSKQEIRRQMIDGRSGEMTIKTLIKSMDERYVDEVIRMYSWTPINDTDYSLGLVLP
PYSEYYIQADLSDVMLQLQYLQSLLPNSFESAGHVFLAPREYCKRLQMAENNTQFLADFL
SLMVEISPESEDCDQGLIHNLILDSGILWQLATRVWQNKDLNTYGFLALFASTNGGVTRV
YPNMAAESWDEDPEPLNSNFFRRSLDNKGYIFRAPTRTSMDDLLISENGTVGILVTTAVE
VVIGGKTMKPAVVGVKLDLEAWVDKFKILASNVSDSRQAAHKCGPSRSCEMDCEVNSDDL
LCYLIDDGGFLVMSNQRDHWKKVGLFFGEVDPYLMFALYNNSIYARHQTFQYQSACEPTA
SSHTGAAHRGFYVPSIADFLSLAWWTSAAAWSVLQQFLYGLIYSSWFTTVDAWAESSDTK
GSSSCVTVHSQFYFTNTTNSFNVLQDCGNCSRLFHAKRIENTNLLFVVAETLPCSSCEIE
KLLPVRTKSQEENPCDVLNSARYRKGPDKCFDYNLEENTSECGSAHSLHCPMGALLWIQL
LSLYLILRS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcgagatgggctcacgcgtgtctgctgctgatgatggtgattttcagtggatcgtgg
accgcagtggacgcgctcacatttccacagcattacacgatcatgcactgggctcgtcgc
attgaacaggagattgacagagtcttgcagcacatcagcggcgctcagcaactgaagggg
atctacagtgagaagagaagacagttcagtttggtcagaaacaaccctcgagacattgta
gaaaaagtagcaactgacattgagagactgctggccaagaaacgcaaagcactcgagaaa
ctggcgagtgaagcagagcgtcttcagaaagatcatcgctggcaggatggaatcaaggag
gaaaatattgaatattataactctaaagcagagatggactatgatggtgaggacatcgat
tctcagatgtcgctgaaactggagttcgtgtatgacccgatctttaagaatcatgtgaat
ttctcacacactgccgtccagatccccacagacatctacaaaggcgctccagtaattctg
aatgagctgaactggacacaagcattagagcgagtcttcatggagaacagcagagatgac
ccgtcgttactctggcaagcatttggaagtgccacgggggtcacaagatattacccagct
gctccctggagagcgccggataagatagacctttatgacgtgcgacggagaccctggtac
attcaaggagcgtcatcgccgaaagacatggtcatcctggtagatgtgagcggcagcgtc
agtggactcactctcaaactcatcaaagcttcagtcacagagatgctcgacacgctctct
gacgacgattatgtcaatgtggctaggttcaatgagaaggccgaggcagtggtgccctgc
tttaagcacctggtacaggcaaatgtacgcaataaaaagatctttaaagaggcagtacag
cagatgcaggccaaaggaaccaccgattacaaatccggctttcacttcgccttcaaccag
ctgctcaacaagacaaatgttcctcgagccaactgcaataaaatcatcatgttatttact
gacggaggggaggaccgagctcaggacatctttgagcagtataactggcccaataagacg
gtccgtgtgttcacgttctcggtggggcagcacaattatgatgtcactccactgcagtgg
atcgcatgtgctaataagggatactattttgagatccgctccatctgtgctataaggatt
aacacccaggagtatctggacgtactgggccgccccatggttctggcaggcagaagtgcc
aaacaggtgcaatggaccaacgtctatcaggatgctctgggtctggggctggtggtgacg
gggacgatgccagtcttcaacctcaccgtagacggaaactctcagaatcagctgatttta
ggggtgatgggggtcgacgttcatctggatgagctgaagagactcacaccacagtacaag
ctgggagcaaatggatacatcttcgccattgacccaaatggatacgtgctcatgcatccg
aacctgcagcctcgagaggaggatttgccagagccggtgacactggacttcctggacgca
gaagtagaagacagcagcaaacaggagattcgtcggcaaatgattgatggccgatcagga
gagatgacgatcaaaacactaattaaatcaatggatgagcgctacgttgatgaggtcata
cgcatgtactcctggacaccaattaacgacactgattacagtctgggtctggtgcttcct
ccgtacagtgaatattacatccaggctgatctcagtgatgtcatgctacagctgcagtat
ttacagtctctgctgccgaactcttttgagtctgccggtcacgtgtttctggcccccaga
gaatactgcaagcgtctgcagatggctgagaataacacacagttcctggcggacttcctg
tctctgatggtggagatctcacctgaatctgaagactgtgatcagggtctcattcataac
ctgatcttggattctgggatcctctggcagcttgccacacgcgtttggcagaacaaggac
ctcaacacgtacggcttcctggcgctgttcgcatccaccaatggaggcgtcacacgcgtt
taccccaacatggctgctgaatcatgggacgaggaccccgagcctctgaactcaaacttc
ttccgtcgcagtctggacaacaaaggctacatctttagagcaccaacacgaacctcaatg
gatgatctgttaatctcagagaacggcactgtggggattctggtcaccaccgctgtggag
gtcgtgattggaggcaaaaccatgaagcctgctgtggttggcgttaagctggatttagag
gcctgggttgacaagttcaagatcctcgccagcaacgtatcagacagcagacaggcagca
cataagtgcggcccatccagatcctgtgagatggactgtgaagtgaacagtgatgatttg
ctgtgttacctgattgatgatggtggtttcctagtgatgtccaatcagagagatcactgg
aaaaaggtgggactgttttttggcgaggtcgacccctacctgatgttcgccctctataac
aactcaatctacgcacgccatcagactttccagtatcagtcggcctgcgagccgacggcc
agcagccacacgggagccgcgcacagaggattctacgtgccctccattgctgattttctc
agtctggcctggtggacgtcagcagcggcgtggtctgttctccagcagttcctgtatgga
cttatctacagcagctggttcaccacagtagacgcctgggctgagagttcagacactaaa
gggagcagcagctgcgtgacggttcacagtcagttctacttcaccaacaccaccaactcc
ttcaacgtgctgcaggactgtgggaactgctccaggttgttccacgccaagcgtatagaa
aacacaaacctgctgtttgtggtggctgagacgctgccttgcagctcttgcgagatcgag
aaactcctacctgtcagaacaaagtctcaagaagagaacccatgtgatgtgttaaattct
gcccgctatcggaaaggacctgacaaatgcttcgactacaacttggaggagaacacgtct
gagtgtgggagcgctcattctttacactgtccaatgggagctctgctctggattcagtta
ttgtcactttacctcattctacgatcataa
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