Ctenopharyngodon idella (grass carp): 127521073
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Entry
127521073 CDS
T08802
Name
(RefSeq) vascular cell adhesion protein 1b isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127521073
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cide04090
]
127521073
04091 Lectins [BR:
cide04091
]
127521073
CD molecules [BR:
cide04090
]
Proteins
127521073
Lectins [BR:
cide04091
]
I-type lectins (Siglecs)
127521073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
ICAM1_3_5_D2
Izumo-Ig
Ig_4
Ig_5
C2-set_2
ICAM_N
C1-set
Motif
Other DBs
NCBI-GeneID:
127521073
NCBI-ProteinID:
XP_051765896
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All DBs
Position
10:13467115..13473504
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AA seq
813 aa
AA seq
DB search
MDSAFLLTLLLPVAVVSHVLDMPPKALFKVGDRKELTCRMSSCPEKVNFVWTSLEDKPLF
ATVITKDRESVLVFDKVTMNHENNIVCKASCGKEIKQATTAITVYSFPRNPVISMYDRLI
LGKENVLACEVSSVYPSEFLEVQWLYGDTVMKTAEGELGKDVLSIPYIFTPSSEDDGKAI
TCRATLNVDGISLDEMTKETSELMKVLSAPHNVKVSGATAVSLGSSLTLTCEAEGNPKPA
FTWTALKPDGQSVEMGKSQDLFMHNVSLSDAGTYQCDVSNDLGRQNTTVSVVVQAPPMGT
LIVASPRSSLKEGDTVSISCKSNRVPVTKVVLSREENGAYNELMTSEGAETSVILHSVKL
AHSGVFVCEAFNEYGRQRTTLSLTVEAHFLEVELQPDSVIVSDRGSSLVLSCQASGCPHP
EFFWKNPSNMSILGRIKTDGFQSQLFLDPVEVEDEGTYLCEVTCGSIKKSKQTEVKVFSF
PTNPIIKSSGPCLVGEMMKLTCTVQEVFPANLFQILWLDGETVKHLESGSFSSGATNLTS
VYSYHVDRKDQGKLITCKVLLDMHGLPVPQVVKTASTTLSVHYPPIATRITVSPMTELKE
GESVSISCVSDSFPVGRTVLSKMADGIQTELMASDRAETLLTLPSVELDDSGLYVCQASN
MYGNHSDSMEITVKAPPRNMTVEIYPSTDVQEGQNITICCRSVSFPPPAVILSKLDSETN
IYSYDGVFLLINLTPNDTGLYQINVTNDLGYETEIFNINVMEKRFDPPLGWNDFIIPAIF
LGVAAALFGAVVNVWRARKKGSYDLTKCNPGTV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggattcagcttttcttttgactttgcttctaccagttgcagttgtttcccatgtactg
gacatgccacccaaagctctgttcaaagtgggcgacaggaaggagttgacatgcagaatg
tcatcttgcccagagaaggtgaattttgtttggacctcattagaagacaaaccgttattc
gccactgttattacaaaggacagagaatctgtgctggtctttgataaagtgacgatgaat
cacgaaaacaacatagtgtgcaaagcatcctgtgggaaggaaataaaacaggcgaccacg
gcgattacagtttattcttttccaagaaatccagtaatatccatgtatgatcgcttgata
ctgggaaaggaaaacgttttggcctgtgaagtgtcttctgtatacccttcggagttcctt
gaagtgcagtggttatatggagacacagttatgaagactgctgagggtgaacttggcaaa
gatgtactgagtattccttacatattcacaccttcaagtgaggatgatggaaaggcaata
acgtgcagagcaacactgaatgtggacggtatatccctggatgagatgaccaaggagacg
tctgaactcatgaaagttctttctgcaccgcataacgttaaagtatctggagcgaccgct
gtctcactgggatccagtttaactttgacctgtgaggccgagggcaacccaaagcctgca
tttacatggacggctcttaaaccagatggccagtctgtggaaatgggaaaaagtcaagat
ctcttcatgcataacgtgtccttatcggatgctggtacttatcagtgtgacgttagcaat
gacttgggaagacaaaacaccacagtttcagtagtggttcaagcacctcctatgggcacc
ctcattgtagcaagtccacggtcaagtctgaaggaaggagacactgtgagcatttcctgc
aagtccaaccgtgttccagtaacaaaagtagtgcttagcagggaggaaaacggagcatac
aacgagctcatgaccagtgaaggggctgaaacatcagttatcctccactccgtcaagctg
gcccactctggcgtgtttgtttgtgaggctttcaatgagtacggcagacagaggaccact
ctcagtctaactgttgaggctcattttctagaagtggagctacagccagatagtgtgatc
gtgtcggacagaggctccagtttggttctctcctgtcaggcttcaggatgccctcacccg
gagttcttctggaagaatccttcaaacatgtcaattctcgggcgaattaagactgatggt
ttccagtcccagctgttcctcgatccagtggaggtggaagatgagggaacttacctctgt
gaggtcacatgtggctcaatcaagaagtccaaacagacggaagtgaaggtgttttcattt
ccaacaaatcctatcataaaaagttctggaccttgtctggtgggagagatgatgaaattg
acctgcactgttcaggaagttttcccggctaaccttttccaaatcctgtggctggatgga
gagacagtaaagcatttggaatctgggtcattttcaagtggagcaacaaatctgacttca
gtgtattcttaccacgtagacaggaaagaccagggcaaactcattacctgcaaagtcttg
ctggacatgcatggtttgccagtaccgcaagtagtaaagacggcatctactacgttgtca
gttcactatccccccatagcgaccaggatcactgtcagcccaatgacagagttgaaggaa
ggagaatctgtgagcatttcttgcgtttctgacagctttccagtggggcgtacggtgctg
agcaagatggcagacggcattcaaacagagctaatggccagtgatagagctgaaacattg
cttaccctcccttcggttgagctggatgactctggcttatatgtttgtcaagcttctaat
atgtatggaaatcacagtgatagtatggagattactgtgaaagcaccacctaggaatatg
acggtggagatctacccatccacagatgttcaggaggggcagaatatcaccatctgttgt
cgctctgtgagcttccctccacctgcggtgatcctcagcaagctggatagtgagacaaac
atctactcttatgatggcgtcttcctactgatcaacctcactcccaatgacacaggcctg
tatcagatcaacgtcaccaacgacctgggctatgagacggagattttcaatatcaatgtg
atggagaaaagatttgaccctccattgggttggaatgacttcataatccctgcgattttc
ttgggagtcgctgctgcgctgtttggtgctgtagtgaatgtgtggagagccagaaagaag
ggatcatacgaccttacaaagtgcaatccgggcactgtgtag
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