Ctenopharyngodon idella (grass carp): 127525310
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Entry
127525310 CDS
T08802
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04020
Calcium signaling pathway
cide04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127525310
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127525310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127525310
Ion channels [BR:
cide04040
]
Ligand-gated channels
Glutamate (ionotropic)
127525310
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
127525310
NCBI-ProteinID:
XP_051773738
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All DBs
Position
13:complement(1426306..1459669)
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AA seq
966 aa
AA seq
DB search
MRLLLLAALFSCSCVRGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGREKFKLTAI
SVTHKANAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENQDQLSFDNKRGPKAEKVLQFNQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKTARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHISD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNKQRKIIWPGGETERPRGFQMSTRLKIVT
IHQEPFVYVKPTMLDGTCKEEYTPNGVLIKKVICTGPNETIPGRPIVPQCCYGFCVDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDNKESSGSQAVGAAGTPSLPS
SSVETQDDRKSGRADSDPKKKPSFRSISTTLASSIKRRRSSKDTQFPPTDITGQLNLSDP
SVSTVV
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcttcttctagctgcgttattctcctgctcctgcgtgcggggcggctgcgag
cccaagattgtgaacattggggccgtcctgagccagaagagatacgagcaggtgttcaag
gatgcggttacccaggcgaaccaggtgtacggaagggaaaaattcaagttgaccgccatc
tccgtcactcacaaagccaatgcgattcagatggcgctgtctgtgtgcgaggatcttatt
tccagtcaggtatacgccatcctggtgagccatccaccacagtctaatgaccatctgacg
cccactccggtctcctacaccgcagggttctaccgcatacctgtagtagggctcactacc
aggatgtccatttactcagacaagagcatccatctctcgttcctgcgtacagtgccacca
tattcccaccaggcacatgtgtggtttgacatgatgcgggaattccgctggaatcacatc
atccttatcgtcagtgacgaccatgaaggcagagcggcgcagaaaagactagaaactctt
ctggaggagagagagaccaagaataaaaaaaggaactatgaaaaccaagaccaactgtcc
tttgacaacaagagaggacctaaggccgagaaagtgcttcagttcaaccaagagactaac
ttaactgctctgctcctggaggccaaagagctggaggctcgagtgatcattctctctgcc
agtgaggaagatgcagccgccgtgtacaaaacagcgcgcttcctcaacatgacaggctca
ggctatgtatggctggtcggggagcgtgagatgtccggtaaagctttgagcgaagcccct
gatgggctgattggcctccagctcatcaacggcaagaatgagtcggcacacatcagcgat
gccgttgcagtcgtagcccagtccatccaagagctcttcgagaaagagaacatcacagaa
cctccaaggggctgtgtgggaaataccaacatctggaagacagggccactctttaaaagg
gtattgatgtcttctaagtaccctgagggcctaactggacgcgttgagttcaatgacgac
ggtgacagaaaatacgctcattacagcattctcaactaccagaagagcagactgattcaa
gtcggcatttacaatggaacacaagtggtgatgaataaacagaggaagatcatttggcct
ggaggtgaaacagagagaccgagaggattccagatgtctactcgattaaagatagtgacc
attcatcaggaaccctttgtatatgtgaagccaactatgctggatggaacctgcaaggaa
gagtacacgcctaatggagtcttaattaaaaaggtgatctgcactggaccaaatgagacc
atcccaggacgcccaattgttccccagtgttgctacggattttgtgttgatcttctgatc
aaactggcaatgaccatgaacttcacctatgaagtacacttggtggcagatgggaaattt
ggaacacaggaaagagtaaataacagtaacaagaaggagtggaacggcatgatgggtgag
ctcctgggtggccttgctgatatgatcgttgctcccttgacgatcaacaatgaacgagcc
cagtacatagaattctccaagccttttaaataccagggactgactatccttgtgaaaaag
gaaattcctcgtagtacactggactcgttcatgcagccatttcagagtacactgtggcta
ctggtgggtctgtcggtacatgtggtggcggtgatgctttacctactagaccggttcagc
ccatttggaaggtttaaagtaaacagcgaagaagaagaagaggatgccctcaccttatct
tcagctatgtggttttcctggggcgttttgttgaactctggaatcggagaaggtgcccca
cgtagtttttcagcgagaatcttaggaatggtgtgggctggcttcgctatgattatagta
gcatcttatactgccaacctggctgccttcctggtgttggaccggcctgaggagcgcatc
accggcatcaatgacccaaggctgaggaacccatcagacaagttcatctatgccacagtg
aagcagagttcggtggatatttacttccggcgacaagttgagctgagcaccatgtaccgc
cacatggagaagcacaactacgagagcgccgctgaagccatccaggctgttcgggacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggctattctcagttcccatgagaatggcttc
atggaggacctagataaaacctgggtgagataccaggagtgtgactcaaggagcaatgcc
ccagccacactcacctttgagaatatggcaggtgtcttcatgctagttgctggaggcatt
gcagcaggcatcttcctcatcttcatcgaaattgcatataagcgccataaagacgcccgc
aggaagcagatgcagctagcctttgcggccgtcaacgtttggaggaagaacctacaggac
aataaggagagctcagggagtcaagctgtgggtgcggctgggactccatctttaccctct
tcctctgtagagactcaggatgataggaaaagtggtagagcagacagcgacccaaaaaag
aaaccctcttttaggtccatcagtaccaccctggcctccagcatcaagagacgtaggtcc
tccaaagacacgcaattcccacccacagacattacgggccaactcaacttgtccgacccg
tctgtcagcacggtggtgtga
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