Citrobacter sp. FDAARGOS_156: AL515_01880
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Entry
AL515_01880 CDS
T04313
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cif
Citrobacter sp. FDAARGOS_156
Pathway
cif00071
Fatty acid degradation
cif00280
Valine, leucine and isoleucine degradation
cif00310
Lysine degradation
cif00362
Benzoate degradation
cif00380
Tryptophan metabolism
cif00410
beta-Alanine metabolism
cif00640
Propanoate metabolism
cif00650
Butanoate metabolism
cif00907
Pinene, camphor and geraniol degradation
cif00930
Caprolactam degradation
cif01100
Metabolic pathways
cif01110
Biosynthesis of secondary metabolites
cif01120
Microbial metabolism in diverse environments
cif01200
Carbon metabolism
cif01212
Fatty acid metabolism
Module
cif_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AL515_01880 (fadB)
00650 Butanoate metabolism
AL515_01880 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AL515_01880 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AL515_01880 (fadB)
00310 Lysine degradation
AL515_01880 (fadB)
00380 Tryptophan metabolism
AL515_01880 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AL515_01880 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AL515_01880 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AL515_01880 (fadB)
00930 Caprolactam degradation
AL515_01880 (fadB)
Enzymes [BR:
cif01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AL515_01880 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AL515_01880 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AL515_01880 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AL515_01880 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AMH12680
LinkDB
All DBs
Position
complement(402854..405043)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGHALDVLEKQPNLKGLLLRSN
KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLSAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALK
IGLVDGVVKQDKLLDGAIAVLRQAINGDLDWKAKRQPKLEPLKLSKIEAAMSFTIAKGMV
AQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTSEARALVGIFLNDQFVK
AKAKKLTKNIEAPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLL
NKQLERGKIDGLKMAGVISTIHPTLDYSGFERVDVVVEAVVENPKVKKAVLAETEDKVRP
DTVLASNTSTIPINELASALKRPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAW
ASQMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMSAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDNKGKP
KKEEDATVDGLLADISQPKRDFSDEEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPAGLRDKARHNEPYYPQVEPA
RPVGSLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaaaggcgacaccctgtacctcgactggctggaagatggcatcgccgaactg
gtgttcgatgcccctggttcggtcaataaactcgacacggccaccgttgccagcctgggc
catgcgcttgatgtgctggaaaaacaaccgaatttaaaagggctgctgctgcgttctaac
aaagcagcctttattgttggtgccgatatcaccgaattcctttcactgttcctcgtgcct
gaagaacagttaagccagtggctgcattttgccaacagcgtctttaaccgcctcgaagat
ctgcctgttccgaccctctctgcggtaaacggttacgcgctgggcggtggctgcgagtgt
gtcctggcaaccgattatcgtctggcaacaccagacctgcgcattggcctgccggaaacc
aaactgggcattatgccgggctttggcggttccgtgcgtatgccacgtatgctgggcgcg
gacagcgcgctggaaatcattgctgcaggtaaagatgttggcgctgaccaggcgctaaaa
atcggcctggtcgatggcgtggtgaagcaagacaaactgcttgatggcgcgattgccgta
ttacgtcaggcgattaacggcgaccttgactggaaagccaaacgtcagccgaagctggag
ccgttgaaactcagcaaaattgaagcggctatgagctttaccatcgccaaaggcatggtg
gcgcagacggcaggtaagcattatcccgcaccgattaccgcggtaaaaaccattgaagca
gcggctcgttttggccgtgaagaagcgctgaatctggaaaataaaagctttgtgccactg
gcgcacaccagtgaagctcgcgcgctggttgggatcttcctgaacgatcagttcgtgaaa
gccaaagccaaaaagctcaccaaaaatattgaagcaccaaagcaagcggcagtgctgggt
gcaggcattatgggcggcggcatcgcttaccagtcagcctggaaaggcgtgccggttgtg
atgaaagatatcaacgacaaatcattaacgctcggaatgaccgaagcggccaagctactg
aacaaacagcttgagcgcggcaaaattgacggtctgaaaatggcgggcgtgatttccact
attcatccaaccctcgactatagcggttttgagcgtgtggatgtggtggttgaagcggtc
gtagaaaacccgaaagtgaaaaaagcggtgctggcggagactgaagacaaagttcgcccg
gatacggtactggcgtcgaatacctccaccatcccaatcaacgaactggccagcgcgctc
aagcgcccggaaaacttctgtgggatgcacttctttaacccggtgcaccgtatgccgctg
gttgagatcattcgcggcgagaaaagctcggatgaaaccatcgccaaagttgtcgcctgg
gcaagccagatgggcaaaacgccaattgtggtcaacgattgccccggtttcttcgtgaac
cgcgtgctgttcccgtattttgccggtttcagccagctgctgcgcgatggggcggatttc
cgcaaagtcgacaaagtcatggaaaaacagtttggctggccgatgggcccagcttatctg
ctggacgtggtgggaattgataccgcacatcacgcgcaggcagtgatgtccgcaggcttc
cctcagcgtatgcagaaagattatcgcgacgcgatagacgccctgtttgatgctaaccgt
ttcggacagaaaaacggtcttggattctggcgttataaagaagacaacaagggcaagccg
aaaaaagaagaggatgccaccgttgacggtttgctggcagatatcagccagccgaagcgc
gactttagcgatgaagaaattatcgcccgcatgatgatcccaatggtcaacgaagtggta
cgttgtctggaagaaggcattatcgccagcccggcagaagccgatatggcgctggtgtat
ggcctgggcttccctccgttccacggcggcgcgttccgctggctggatacgctcggcagc
gcgaagtatctcgatatggctcaacagtatcagcaccttggcccgctgtatgaagttccg
gccggtctgcgtgacaaagcgcgccataacgaaccgtattatccccaggttgagcctgcc
cgcccggttggcagcctgaaaacggcttaa
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