Citrobacter sp. FDAARGOS_156: AL515_01960
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Entry
AL515_01960 CDS
T04313
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cif
Citrobacter sp. FDAARGOS_156
Pathway
cif03030
DNA replication
cif03410
Base excision repair
cif03420
Nucleotide excision repair
cif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL515_01960
03410 Base excision repair
AL515_01960
03420 Nucleotide excision repair
AL515_01960
03440 Homologous recombination
AL515_01960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cif03032
]
AL515_01960
03400 DNA repair and recombination proteins [BR:
cif03400
]
AL515_01960
Enzymes [BR:
cif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL515_01960
DNA replication proteins [BR:
cif03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AL515_01960
DNA repair and recombination proteins [BR:
cif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AL515_01960
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL515_01960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AMH12690
LinkDB
All DBs
Position
419387..422173
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAESDKIAGLSFRGAKTMAGKLEQNK
EVAYLSYKLATIKTDVELELTCEQLEVRQPAAEELLGLFKQYEFKRWVTDVEAGKWLQAK
GTKPAAKPQETIVVDETPEEPATVLSYDNYVTILDEATLEEWIAKLKKAPVFAFDTETDS
LDNISANLVGLSFAIEPGVAAYVPVAHDYLDAPDQISRDRALALLKPLLEDENAHKVGQN
LKYDRGILANYGIELRGITFDTMLESYILNSVAGRHDMDSLSDRWLKHKTITFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQKHKGPLNVFENIDMPLVPVLSRV
ERNGVKIDPAVLHKHSEELTLRLNELEQKAHEIAGEAFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLDSVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP
RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNGARRAGAE
RAAINAPMQGTAADIIKRAMIAVDRWLQTEQPRVRMIMQVHDELVFEVHKDDLESVSKKI
HQLMENETQIDVPLLVEVGSGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaacccacttatccttgtagacggttcatcttacctgtatcgc
gcataccacgcgttcccgccgctgacgaacagcgcaggagagcctactggtgcgatgtac
ggcgtcctcaatatgttgcgtagcttgattctgcaatatcaacctacgcatgcagcggtg
gtattcgacgctaagggtaaaaccttccgtgatgaattattcgaacactataagtcgcac
cgcccgccaatgccggacgatttacgtgcgcagattgaacctctgcatgcgatggtaaaa
gcgatggggctgccattgctggcggtttcaggcgtggaagcggacgatgtcatcggtacg
ctggcacgtgaggcagagaaggtggggcgtccggtgctgattagcaccggcgataaagat
atggctcaactggtgacgccgaacatcaccctcatcaacactatgactaatacgatcctt
ggtccggatgaggtcgtaaataagtacggtgttccgcctgaattgatcatcgatttcctg
gcgctgatgggggactcctcagataacattccaggtgtaccaggcgtgggtgaaaaaacg
gctcaggcgttgctgcaggggctgggtgggttggatactctctatgcggaatccgacaaa
atagcagggctgagcttccgtggtgccaaaaccatggcaggcaaactcgagcagaataaa
gaagtggcgtatctctcgtataagctggctaccatcaaaacggatgttgagctggaatta
acctgcgagcagctggaagtgcgccaaccagcagcagaagaactgctgggcttgtttaaa
cagtatgaattcaagcgttgggttactgacgttgaagccggtaaatggctacaggcgaaa
gggacgaaaccggcagctaaaccgcaggagaccatcgttgtcgatgaaacgcctgaggaa
cctgccacggtgctttcctacgacaattatgtgacgattctggacgaagcaacgctggaa
gagtggattgcaaagctgaagaaagcgcccgtctttgcctttgatactgaaactgacagc
ctggacaacatctccgcgaatctggttggcctgtcttttgccattgagccaggtgtggct
gcgtatgttcctgtcgctcatgattacctggatgcccccgatcagatctctcgcgaccgc
gcgctggcgctcctgaagccgctgctggaagatgagaacgcgcataaagttgggcaaaac
ctgaagtacgatcgcggtatcctggcgaactatggcatcgagcttcgcggcatcaccttt
gacaccatgctcgaatcctacattcttaacagtgttgcaggccgacacgatatggacagc
ctgtcagatcgctggctgaaacataaaaccatcacctttgaagagattgccgggaaaggt
aaaaaccagctgacctttaaccagatagcactggaagaggccgggcgctatgccgcagaa
gatgccgatgttacgcttcagttgcatctgaaaatgtggccagaactgcagaagcacaaa
gggccgctaaatgttttcgaaaatattgatatgccgctggtcccggttctgtcccgcgtt
gagcgcaatggtgtgaaaatcgatccggctgttctgcacaagcattcagaagagctgacg
ctgcgtttgaacgagctggagcaaaaagcgcacgagattgccggagaagcgtttaacctt
tcttctaccaagcagctgcaaactatcttgtttgaaaagcaaggtattaagccgctgaag
aaaacccctggcggcgcgccatcaacgtcagaagaggtgctggaagagctcgcgctggat
tatccgttgccgaaagttatcctggaatatcgtgggttagcaaaactgaagtcgacctac
acggataagcttccgttgatgatcaacccaaaaaccggacgcgtacatacctcctatcat
caggcggttacggcgaccggacgtttgtcttcaaccgatcctaacctgcaaaacatcccg
gtacgtaacgatgaaggtcgtcgtattcgccaggcatttatcgcaccagaagactacgtg
attgtctctgcggactactcgcagatcgagctgcgtattatggcgcatctctcgcgcgat
aaaggcctgcttaccgcgtttgccgaagggaaagatattcaccgtgcaacggcggcagaa
gtttttggtttaccgcttgattctgtgaccagcgagcaacgtcgtagcgcaaaagccatt
aactttggtctgatctatggcatgagcgccttcggtctggcgcgtcagctgaatattccg
cgtaaagaagcacagaagtacatggatctctacttcgaacgctacccaggcgtgttggaa
tatatggaacgcacccgcgcgcaggcgaaagagcagggctatgtagaaacgctggaaggt
cgccgtctctatttaccggatattaaatccagtaatggcgctcgtcgcgccggtgcagaa
cgcgcggcaattaacgccccgatgcagggtactgccgcagacattatcaaacgagcgatg
attgcggtggacagatggctgcaaaccgagcaaccgcgtgtgcgtatgatcatgcaggtg
cacgatgaactggtgtttgaagtgcataaagatgacctcgaaagcgtctcgaaaaagatc
catcagctgatggaaaacgagacgcaaattgatgtgccattgctggtggaagttggtagt
ggtgaaaactgggatcaggcgcactaa
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