Corynebacterium ihumii: CIHUM_05145
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Entry
CIHUM_05145 CDS
T09115
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
cihu
Corynebacterium ihumii
Brite
KEGG Orthology (KO) [BR:
cihu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cihu03009
]
CIHUM_05145 (rsmD)
Enzymes [BR:
cihu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
CIHUM_05145 (rsmD)
Ribosome biogenesis [BR:
cihu03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CIHUM_05145 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
Methyltransf_25
PrmA
Met_10
RsmJ
Methyltransf_16
Methyltransf_24
TRM
UPF0020
N6_N4_Mtase
N6-adenineMlase
DNA_methylase
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
WCZ34456
LinkDB
All DBs
Position
1035566..1036156
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AA seq
196 aa
AA seq
DB search
MNRIISGEARGRKIKVPPEGTRPTSDRAREGLFSSLQVRFGFVDMHVLDLFAGSGALGLE
AASRGAAEVVLVENNPEAVRVIEYNAGVVGHPNATIEPVKASTYLARAPRNHFDIVLADP
PYELADEAVAEMVEALKPVLHDGAVVVVERHRESPETAWPKEFTPTGQKLKKRLYGIARM
DMAVYSNPETEAEVEE
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcatcatttccggcgaggcccgcggccgcaagatcaaggtgccgccagagggc
acacgtcccacctcagaccgagcacgcgagggcctgttttcctccctgcaggtccgattc
gggttcgtggatatgcacgtgcttgacctgttcgccggttccggtgcgctggggctggag
gcggcctcccgcggagcggcggaggtggtgctggtggaaaacaacccggaggccgtgcgc
gtcatcgaatacaacgcaggtgtggtcggccacccgaatgcgaccatcgagccagtgaag
gcatcgacgtatctcgcccgcgcgccgcgcaaccacttcgacatcgtgctcgcggacccg
ccgtacgagctcgcggatgaggccgtcgcggaaatggtggaggcgcttaagcccgtgctt
cacgacggcgccgtggtcgtcgtcgagcgccaccgcgaaagccccgagacggcctggccg
aaggagttcaccccgaccggccagaagttgaagaagcgcctgtacggcatcgcgcgcatg
gacatggccgtgtactcgaatccggaaactgaagcagaggtggaggagtaa
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